Urbifossiella limnaea: ETAA1_43010
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Entry
ETAA1_43010 CDS
T07028
Symbol
uvrB_2
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
uli
Urbifossiella limnaea
Pathway
uli03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ETAA1_43010 (uvrB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uli03400
]
ETAA1_43010 (uvrB_2)
DNA repair and recombination proteins [BR:
uli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ETAA1_43010 (uvrB_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ETAA1_43010 (uvrB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_25
AAA_5
AAA
AAA_16
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QDU22323
UniProt:
A0A517XXV8
LinkDB
All DBs
Position
complement(5168407..5170554)
Genome browser
AA seq
715 aa
AA seq
DB search
MAAKFQLVSDYPPAGDQPKAIEQLVAGFERGKSFQVLLGATGTGKTFTASNVIARLGKPT
LVLAHNKTLAAQLYKEFKGFFPHNAVQYFVSYYDYYQPEAYIPQRDIYIEKDSSINENID
RLRLAATSALVSREDVIIVASVSCIYGLGSPSDYKRMMVYVQKGEVIDRDNLLLRLVDIQ
YQRNDVAFERGKVRVRGDTIDIWPASEEVAYRMELFGDEVDALSVIHPVSGETIKPLEEL
YVYPAKHFVTPEERVKEAITGIEAELTARLEQFKTEGKLLEYERLKARCRYDLDMLREVG
YCSGIENYARWFSGRNPGDPPYTLIDFFPEDFLVVVDESHVSLPQVRGMFHGDFARKTTL
VEHGFRLPSALDNRPLKFPEFEGRLKQCLCLSATPAAYELERVGGEVVEQVIRPTGLVDP
VIHVKPARGQVPDLKSEIQARAAKGERTLVTTLTKRMAEDLTTFFRDAGMRCAWLHSELD
AIERIQVLRELREGTFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTIGR
AARNVNAEVILYADNVTDSMARAMGETNRRRDVQLAYNAAHGITPRSVVTAIRNSIEDEI
EAHKMATEAATGATAAAEADYVTIEYVQSLYAEMLEAAKGLDFERAQKLRDQVVKLESEL
KKKYGDGAPPSVLGGKVIAPRLPEKKKRGKGRRGGADPTLRPTNLPGPRRKPEGA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaagttccagctcgtcagcgactacccgccggccggcgaccaaccgaaggcc
atcgagcaactcgtcgccgggttcgagcgcggcaagagcttccaggttctcctcggggcc
accggcaccggcaagacgttcaccgccagcaacgtcatcgcccggctcggcaagccgacg
ctcgtgctcgcccacaacaagacgctggcggcgcagctgtacaaggagttcaagggcttc
ttcccgcacaacgcggtgcagtacttcgtcagctactacgactactaccagcccgaggcg
tacatcccgcagcgcgacatctacatcgaaaaagacagctccatcaacgagaacatcgac
cgcctccgcctcgccgccacgtccgcgctcgtgagccgggaagacgtgatcatcgtggcg
tcggtgtcgtgcatctacggcctcggctcgccgtccgactacaagcggatgatggtgtac
gtccagaagggcgaggtcatcgaccgcgacaacctgctgctgcggctcgtggacatccag
taccagcggaacgacgtggccttcgagcgcggcaaggtccgcgtccgaggcgacaccatc
gacatctggccggcctccgaggaagtcgcgtaccggatggagctgttcggcgacgaggtg
gacgcgctctcggtcatccaccccgtcagcggcgagacgatcaagccgctggaggagctg
tacgtctacccggcgaagcacttcgtgacgcccgaggagcgcgtgaaggaggcgatcacc
ggcatcgaggccgaactgacggcccggctggagcagttcaagaccgagggcaagctgctg
gagtacgagcggctgaaggcccgctgccggtacgacctggacatgctccgcgaggtgggc
tactgctcgggcatcgagaactacgcccgctggttcagcggccgcaaccccggcgacccg
ccgtacacgctcatcgacttcttccccgaagacttcctcgtcgtggtagacgagagccac
gtcagcctgccgcaggtccgcggcatgttccacggcgactttgcccgcaagacgacgctc
gtcgaacacggcttccgcctgccgagcgcgctggacaaccggccgctcaagttccccgag
ttcgaggggcggctgaagcagtgcctgtgcctgtcggcgacgcccgccgcgtacgagttg
gagcgcgtcggcggcgaggtggtcgagcaggtgatccggccgacggggctggtcgacccg
gtgattcacgtcaagccggcgcgcgggcaggtgccggacctgaagagcgaaattcaggcc
cgcgccgcgaagggcgagcggacgctggtgacgacgctgacgaagcggatggccgaggac
ctgacgacgttcttccgcgacgccgggatgcgctgcgcctggctgcacagcgaactcgac
gccatcgagcggatccaggtactccgcgagctccgcgagggcacgttcgacgtgctcgtc
ggcgtgaacctgttgcgcgaggggctcgacctgcccgaggtgtcgctggtggcgattctc
gacgccgacaaggagggcttcctgcggtcggaaacgtcgctgatccagacgatcggccgg
gccgcccgcaacgtgaacgccgaggtgatcctgtacgccgacaacgtgactgacagcatg
gcgcgggcgatgggcgagacgaaccgccggcgcgacgtgcagctggcgtacaacgccgcg
cacggcatcaccccgcggtcggtggtgacggcgatccgcaactcgatcgaggacgagatc
gaggcgcacaagatggcgacggaggcggcgacgggcgcgaccgctgcggcggaagcggac
tacgtgacgatcgagtacgtgcagtcgctgtacgccgagatgctggaggcggcgaagggg
ctggacttcgagcgggcccagaagctgcgcgaccaggtggtgaagctcgaatcggagctg
aagaagaagtacggcgacggcgccccgccgagcgtgctgggcgggaaggtgatcgccccg
cgcctgccggagaagaaaaagcgtggcaaaggtcgccgcggcggagctgatccgacactg
cgaccaacgaacctacccggccctcgccgaaagcctgagggggcctga
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