Ustilago maydis: UMAG_01174
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Entry
UMAG_01174 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
uma
Ustilago maydis
Pathway
uma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UMAG_01174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uma03041
]
UMAG_01174
Enzymes [BR:
uma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UMAG_01174
Spliceosome [BR:
uma03041
]
Complex A
U2 snRNP components
U2 related factors
UMAG_01174
Complex B
UMAG_01174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
23562272
NCBI-ProteinID:
XP_011387116
UniProt:
Q4PFD9
LinkDB
All DBs
Position
2:complement(1120154..1123624)
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AA seq
1156 aa
AA seq
DB search
MSGYDNRDDYRHSSSSSHHRSRNSKHDSSSSSYRSHGYAPTRRRSRSPSSYHSSSRSHRD
HTTDPYPNGSGHDRRHDRDRNRERDRRDHDSPIEAAPSPDGRRFHVEGAPRQGGRRRWDE
GAPTPPTAAAPVHVSDPTRSSLNTQLPSRPIVAPPGMAPGPPPSLPSSTPIVPSTGISIS
PEEQAKLAKKARLEAWRKEQAAKKALEEARQRARSIASAVAPSSQRTESFSSSSTPQTAP
TSINAAGLRTLSLRTDPSRTTAQNRSRTMMDDASESSKRIHLSRLGDLPPLDPSIDTAHI
ATTSVDAEDDDHQLGVAPPTQGSSAAAMDVDDDDEEEDPLDAFMLTVKSQVAQVNDDDRR
KASASGGHERTQAKSKAVVLGRDDSDGEAEDQYEELDELDRVGMATEDLLALAAKKVKKK
DLVTVDHSAIDYEPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSH
CGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKD
QRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKKTA
DIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNIRPDRQT
VLFSATFPKQMESLARKVLKNKPLEITVGGRSVVAAEIEQIVEVRSEDTKFHRLLEILGE
LYNREKDARTLIFVDRQEAADDLLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAGNVPI
VTATSVAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQDRYAR
DIIAALKASAAHVPPELEAMAASFKEKLAAGKAKAAGSGFGGKGLDRFELDREKTLKAQK
SAYGEADDDAKAAAAGDSSEDKAKTGAPPGASSSEDQLSKIQGMKIEIMQGAAPESVRDN
KTLSASQEASAAAAAAAAARSKAEPEQELKEAAQLKAQEAALEAAKAHGADTTKLAAVLE
NIRRQANARKEAAKNSELDKHKDRKARDPDATDYHAIVPINDFPQRARWRVTNKETMRHL
IESTGASITNKGVFYKEGTEPQPGEPPKLQLLIESNTKSMVEDAVREIQRLLVEATQAVL
EAEARNPGTTGRYTVV
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctacgataatcgcgacgactaccgtcactcttcctcttcttctcaccatcga
tctcgtaacagtaagcatgattcctcgtcctcgtcgtacagaagccatggatacgcgcca
actagacgccgttctcgttctccttcttcgtatcactcctcttcgcgcagtcatcgtgat
cacaccacggatccttacccgaatggttctggccatgataggcggcacgaccgtgatcgc
aaccgagaacgggacaggcgtgatcacgactcccctatcgaagccgcaccttcccccgat
ggccggcgctttcatgtagaaggggcgcccagacaaggcggcagaaggcggtgggatgag
ggtgcaccaacccctccaaccgctgcagcgcctgttcatgtatctgatccgacgcgatcg
agcttgaatacgcagcttccatccagaccaatcgtcgctccacctggtatggcgcctgga
ccgccgccctcgctaccatcttctactccaatcgttccgtccaccggtatctccatctcg
cccgaagagcaagcaaagcttgcaaaaaaggcgcgactggaagcgtggcgcaaggagcaa
gctgctaaaaaggcgctcgaggaagccaggcagcgagctcggtccatcgccagtgctgta
gcgccttcctcacagcgcacagaaagtttctcttcctcatcgacgccacaaaccgctcca
acctctatcaatgctgctggcttgcgaacgctgtctttacgaacggatccatctaggacc
acagcgcagaaccggtcgcgcaccatgatggacgacgcttcggagtcgtcaaagcggata
catctcagtcgtctcggtgatttgccccctctggatccatctatcgacacggctcacata
gctacaactagcgttgatgccgaggatgatgatcaccagctcggagttgcgccacctacc
caaggctccagcgctgctgccatggatgtggacgatgacgacgaagaggaagacccccta
gacgcgttcatgttaactgtcaagagccaagtggcacaggtcaacgacgacgatcgacgt
aaggctagcgccagcggcggccacgaacggacacaagccaaatcgaaagcggttgtgcta
ggacgagatgatagtgacggcgaagccgaagaccaatacgaggagctcgacgagctcgac
cgcgttggtatggcgacagaggacctcttggcgctagcagccaaaaaggtcaagaagaag
gatcttgtcaccgttgatcattccgccatcgactacgaaccattcaacaaagctttctat
caccctcctgccgagattcaagacatgtcggaagagctggccaatcagatccgccttgag
atggacgccatcacagtgcgtggcagggactgccccaagcctctcaccaagtggtcacat
tgcgggttacctgcaagctgtttggatgtgattaagcgtctcggttactctgctcccact
ccgattcagagccaggcaatgccggcgatcatgtccggccgagacattatcggcgtggca
aagacaggctcgggcaagaccatggcttttcttctgcccatgttccggcacatcaaagat
caacgtcctgtcgagccttctgagggtcctgtcggcatcatcatgacgcccactcgcgag
cttgccgtccagatctaccgcgagatgcgacctttcatcaaggctctcggccttcgcgcc
gcttgcgtgtacggaggagcacccatctcagagcagattgccgagatgaaaaagacggct
gacattgtggtggcaaccccgggccggctgatcgatctgttgacagctaactcaggccgc
gtcaccaacctttatcgtgtcacttaccttgtgctcgacgaagccgaccgtatgttcgac
atgggattcgagccgcaggtcatgaagatcctcaacaacattcgcccagatcgtcagacg
gtgctgttttccgccacgtttccaaaacaaatggaatcgctggcgcgcaaggtactgaag
aacaagccgcttgaaatcactgtcggtggtcgcagcgtagtagctgctgagattgagcag
atcgtcgaggtgcgctccgaagacaccaagttccatcgtctcctcgagatcctcggcgag
ctatacaaccgagaaaaggatgcacgtacactcatctttgttgatcgtcaagaggctgcc
gacgacttgctcaaggacttgattcgcaaaggatatgtaactatgtcgctacacggtggc
aaggatcaagtggatcgcgacgaaaccatctctgacttcaaagcgggcaatgtgcccatt
gtcacagccacttcggtcgctgcgcgtggcctcgacgtgaagcagctcaaactggtcatc
aattacgacgtacccaaccacatggaggactatgtgcaccgcgctggacgaaccggtcgt
gcaggtcaaaagggaacatgcatcacctttattacgcccgagcaggaccgatacgcacga
gacattatcgcagcactcaaagccagtgcagcacatgttccgccagaactcgaggctatg
gcagcatccttcaaagagaagcttgcggccggcaaggccaaggcggctgggtccggtttt
ggtggcaagggtttggatcggtttgaactagatcgcgaaaagacactcaaagcgcaaaag
tcggcctacggcgaagcggatgatgacgccaaggcagccgcggcgggcgattcgagcgag
gacaaagccaaaacaggcgcgccacctggagcatcgagtagtgaggaccagctgagcaag
atccagggcatgaagattgagattatgcaaggcgcggcacccgagtctgtgcgggacaac
aaaacactctcggcaagtcaagaggcatccgctgctgctgctgctgctgccgctgccaga
agcaaagcggaaccggagcaagagttgaaagaggcagcacagctcaaagctcaagaagcg
gcgctcgaagctgccaaggcacacggtgcagatacgaccaagctcgccgctgtgctggaa
aacatccgcaggcaggccaatgcccgaaaggaggcagctaagaactctgagctagacaag
cacaaggatcgcaaagctcgcgacccggatgcgaccgactaccacgcgatcgtgccgatc
aacgacttcccgcagcgagcgcgatggagagtcaccaataaggagacgatgagacacttg
atcgaatctacgggagcatcgatcaccaacaagggcgtcttctacaaggagggcacagag
ccgcaaccaggcgagccgccaaagctgcagctgctgatcgagtcaaacaccaagtcgatg
gtggaggatgcggtgcgcgagattcagcgtctgctggtggaagcgacgcaggccgtgctc
gaggccgaagcaaggaaccctggcacaacgggccgatacactgtggtgtga
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integrated database retrieval system
