Ustilago maydis: UMAG_12154 Help Entry UMAG_12154        CDS       T01021                                  Name (RefSeq) hypothetical protein   KO K12600   superkiller protein 3 Organism uma  Ustilago maydis Pathway uma03018   RNA degradation Brite KEGG Orthology (KO) [BR:uma00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     UMAG_12154  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:uma03019]     UMAG_12154 Messenger RNA biogenesis [BR:uma03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ski complex      UMAG_12154 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_2 TPR_1 TPR_8 TPR_17 TPR_16 TPR_19 TPR_9 TPR_12 TPR_14 TPR_22 TPR_6 TPR_7 TPR_11 ChAPs Motif Other DBs NCBI-GeneID:  23567912 NCBI-ProteinID:  XP_011386847 UniProt:  A0A0D1ECR1 LinkDB All DBs Position 1:complement(1298420..1303102) Genome browser AA seq 1560 aa AA seqDB search MSSAYVKQKLKQSRDALAKKEWQAAAEAATSVLEQERCNYNANVFLGLALLNQEKFDESE AAYISATRDQPTQLLAWQGLQKFYDQRKSWDKLRDVLYKLMDLYNDAGDATKCAETLQRL LALEREEGGRKRVIDTLELLLPDSKYYPCISTLDPPDQTQPEKTTTFDTQMAIYVTSLDT LLEIIHLSEKWEADTIQKEVDKRRMRLDGANKGKEALIKEVRLEAYSVSRLPYFYEQILA HPKAEDELRIEVEAKLLRHRYALLTSFPPKQLTSGNAPTGTAAVDRQQQEKQQQAEQQQD ESKRALRDEVLKLASGMVIIGRPDELAWSIDLEWRPLFSLADLRLELIRKFVTLFPRSGR TKAYRAYLLLIKDEQFLHEIKEEEERADTEIPLPQNLDDLLNLAIDGLEECPDSILAHRI AATFYLLDHDFQSASEVASSALHVVSRIEAESAVDLEQCRIGISKTLLSALTHLHPPQHH ARASRLAESTLQVISSDIDTLLAKAYIEQRSDRWESARTIFENVRTLVAAQDSGDYRYRI ERLLSLSHHPDQEAWIEVAWCDVNIGNLEKAKQELETILEKVDPVAYQGASAGLRAKLWW RLGRCLWLMGDEYRTNPAHAFTAFITALKRNPAFAPAYTSLGFYYQDVLEPPDLERSSKC FQKAFELDSREDEAARRLAVGFAEEQEWDLVEVVARRTIEGEGGAVVIGDHTSAALHASR RHLSRNAWAWKAIGNVEIAKKHFEDAILAFQIALRADPDDQVSWQRLGQAYALAGRHIAA LKCFAKCLELVEANGDPEDDGWQARYSIGDVHLELGNFSTAVETFTDILAKHPDELGVRV ALSNAYLLSSRQEKATCYIERAESSANRAIREAAHTLLHHDKHLRSAWKIVADAVFHLSR FGRLRQAASLLTADGGGELGPILRLARELETDAKLPSISVVTYEKLTVSDGAAKLSSFRL LQISVYLYKLRVVLNASDEKVAGSAWADLATSLYCASRDMLLPSSQPFLSPPASLSVVDF AEMQSTQARLQAIGSVKQALRHEPGQEAYWLLLGNLTFHSSVKLAQHCFIRAIENAPKSA VGWTNLGLLYLHHGDVELANESLIKAQTVDPDYGAAWVGQGLIAQHFGDHRASRVLFEHA VSLTEGSVQEADYCLGKAVFDAFRRHAATNAADSRITEATLSSASFAMSAYLSISPTDID ALHLSALLSERLGQMDLAIDRISKAALLLEERYEATEMIEVAHQYAIAESNRGRIRLAAG DYQGAASAFEAAVGLLDGEDDEEQSENDDVADEKIDRQLILDAKIQAQLGLGLSRHFSGQ HEDALIGMRQAITTAQTSSSGTTSFDLTLQYAKLLWACKGSSAIEEVKTQLFNNIQSEQG TSVHVASILALAVLALASQDADLLDAAESELETVLQNETCSLDTVIRLLVAIKSLSTTQP ASALALIHDAIQTTISRRDKDQRSLFHLHLTYLSHAVQLLDTAPDSLAEQETSELLAYAQ LTQDLYDTYARVYYEVEKQGPKMRVLLDKVNGKVSDQSGAKRKDAHVELALLDMPWVLAA NT seq 4683 nt NT seq  +upstreamnt  +downstreamnt atgtcttccgcatacgtaaagcagaagcttaagcagtctcgcgatgcgttggccaaaaag gagtggcaggcagctgccgaagctgcaacgagcgtactagagcaagaaaggtgtaactac aacgccaatgtctttctcggtctcgccttgctgaaccaggaaaagtttgacgagtcagaa gcagcctacatctcagcaacacgcgatcaaccaacacagttgctagcatggcaagggtta cagaaattttacgatcaacgcaagagctgggacaagttgcgagatgtgctttacaagctc atggatctttacaacgacgcaggagatgcaacaaagtgtgcggaaaccctacagcgtctg cttgcgctggaacgagaagaaggcgggcgcaagcgtgtgatcgatactttggaactgctg cttcccgactccaagtactacccctgtatttcaacgctagacccaccagaccagacccag ccggaaaagacaaccaccttcgacacacagatggccatttatgtcacgagtctggacaca ctgctcgaaataatccacttgtccgaaaagtgggaggctgataccatacagaaggaggta gataagcgaaggatgcgtctcgatggtgctaacaagggcaaggaggcgctcatcaaagag gtccgtctagaggcttactcggtttcacggcttccatacttctacgagcagatcttagca catcccaaggcagaagacgagcttcgaatcgaggtggaagctaaattgctacgacatcgt tatgctcttctcacctcgttcccaccaaagcaactgacaagcggcaacgcgcctacaggt acagcagcggtggaccggcagcagcaagagaagcagcagcaggccgagcaacagcaggac gagtcgaagcgcgctttgcgagacgaagtcctgaagctcgcatccggcatggtcattatt ggtcgacctgacgaattggcgtggagcatcgatctcgagtggcgtccgcttttctcgctt gcagatctgagactcgaactgattcgcaagtttgtcacactcttcccacgatcgggtcgc accaaagcatatcgagcctatttgctgctgatcaaggacgaacagttccttcacgaaatc aaggaagaggaggaacgcgccgatacagaaatcccactccctcaaaacctggacgacttg ctcaaccttgccatcgatggtctcgaggaatgccctgactcgattcttgcccatcgcatt gctgccaccttctatcttcttgatcacgactttcaatccgcttctgaggtggcaagctct gcactacacgttgtcagtcgcatcgaggccgaaagtgctgtcgatctcgagcagtgtcgc atcggtatctctaagacactcttgtcagctctcacccacctacatccgcctcagcatcat gctcgtgcctctcgactggctgagagcacgctacaggtgatttcttccgacatcgatacc ctattggctaaggcctacatcgaacagcgctcagatcggtgggaatctgcccgtacgata tttgaaaatgtgcgcactctcgtcgctgcgcaagattccggtgactacaggtatcgcatc gagcggctcctctcgctcagccaccatcccgaccaggaagcttggattgaagtcgcatgg tgtgatgtcaacatcggcaatttggagaaagcaaagcaggaattggagacgattctggag aaagtggatccagtcgcataccaaggtgcatctgccggtctgcgagccaagctttggtgg cgccttggacggtgcctttggctcatgggtgacgagtatcgcaccaatcccgcacatgca ttcaccgctttcatcacagctctcaaacgcaaccctgcatttgctcccgcctacacatct ctcggcttctattaccaagacgtgttggaaccgccagatttggaacgttcaagcaagtgt ttccagaaagctttcgagctcgattcccgcgaagacgaagctgctagaagacttgcagtc gggttcgccgaggagcaagagtgggacctagtagaggttgtcgcgcgtagaaccattgag ggcgaaggtggcgctgttgtgattggagatcacacatcagcagctctgcacgcttcgagg cgacacctttcccgcaatgcgtgggcatggaaagccatcggtaatgtcgagatcgcgaag aagcatttcgaagacgctatcctcgcatttcagatcgctttgcgggcagacccggatgac caggtctcgtggcagagactcggtcaagcgtatgcgctggcgggaaggcacatcgcagca ctcaagtgtttcgccaaatgcctcgagctagtcgaggccaatggcgatcctgaagatgac ggctggcaagctcgatacagcattggcgatgtgcacctcgagctcggaaacttctccaca gctgtcgagacctttaccgacattctggccaagcatcccgacgaacttggtgtcagggtt gcgcttagcaacgcttacttgctgtcgtctcggcaggaaaaggcaacatgttacattgag cgagccgagagttcggcaaacagagctatacgagaagcagcgcatactcttctccaccac gacaagcacttacgctcagcatggaagattgttgccgatgctgttttccacctcagcagg tttggccggctgcgtcaagctgcctctttgctgacagccgatggtggcggagagctaggc ccgattcttcgactggcaagggagctcgagaccgacgcaaagctcccttcgatcagcgtt gtcacttacgaaaagttgactgtgtcagacggggccgcaaagctttcttcgttccgattg ctccagatcagcgtttatctatacaaactgcgagtcgtgctcaatgcttctgacgaaaag gttgcaggcagtgcctgggccgacctcgctacgtcgctctactgtgcctcgcgagacatg ctcttaccctcgtcgcagcctttcctatcgccacccgcatcgttatctgttgtcgatttc gcggaaatgcaaagcacgcaggctcgactgcaagcgattggatcggtcaagcaagcgctc cgacacgaacctggacaggaggcgtactggctgcttcttggcaaccttactttccactcg tcggtcaagctcgcccaacactgcttcattcgggccatcgaaaatgcacccaagagtgcc gtcggctggaccaacctcggtttgctgtatctccaccacggagacgtcgagctggccaac gagagcttgatcaaggcgcagaccgttgatcccgactacggtgctgcttgggtggggcaa gggctgattgcgcagcattttggcgatcaccgtgcctcacgcgttttgtttgaacatgcc gtctcactgaccgagggcagcgtgcaggaagccgactactgtctcggtaaagccgtgttt gacgctttccgacgacacgccgctacaaatgcagccgactcgcgcattacagaagcgacg ctgtcaagtgcatcgttcgccatgtccgcttacctttcgatctcacctaccgacatcgac gctttgcatctatctgctctcttgtcagagaggcttggacagatggatttggctatcgac cgaatctcaaaagcagctttgttgctggaagagagatacgaggcaacagagatgatcgaa gtggcacaccagtacgcaattgccgaatcgaatcgcggtcggattcgtttagcagcagga gactatcaaggcgcagcaagcgccttcgaagcagctgtcggccttctggatggcgaagac gacgaagagcaatccgagaacgatgatgtagctgacgaaaagattgacaggcaactcatt ctggacgccaagatccaagctcagctgggccttggactatcacgtcacttctctggccaa cacgaagatgctctcattggcatgcgccaagcaattaccactgcgcaaacgagcagctca ggcacgacctctttcgacctaacgttacagtatgcaaagctcctgtgggcctgcaaaggt agctcggccattgaagaagttaaaacgcagctgtttaacaatatccaatctgagcaaggc acttcggttcacgtcgcatcgattctggcgcttgccgtgcttgcgctagctagccaagac gccgacttgctggacgcagccgaatccgagctcgagactgtgctgcaaaacgagacgtgc agtctggacacggtcattagactgctcgtcgcgatcaaatcgttgtctaccacgcagcct gcgtcggcgctcgcgctcatccacgatgccatccagaccaccatctcgcgcagggacaaa gatcaacgctccctgttccaccttcaccttacgtacctgtcgcacgcggtgcagctactc gacacagcaccggattcactggcagagcaagaaacctcggaattgttggcgtacgcccaa cttactcaggacctatatgatacgtatgcgcgcgtgtattacgaggtagagaagcaaggg cctaaaatgcgcgtattgctcgacaaggtgaacggcaaggtctcggatcagtcaggtgcg aaaagaaaggacgcacacgtcgaattggcgctgcttgacatgccctgggtgttggctgcg taa

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