KEGG   Ursus maritimus (polar bear): 103662831
Entry
103662831         CDS       T03271                                 
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
umr  Ursus maritimus (polar bear)
Pathway
umr03013  Nucleocytoplasmic transport
umr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:umr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103662831 (THOC1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    103662831 (THOC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:umr03019]
    103662831 (THOC1)
   03041 Spliceosome [BR:umr03041]
    103662831 (THOC1)
Messenger RNA biogenesis [BR:umr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103662831 (THOC1)
Spliceosome [BR:umr03041]
 Complex C
  Other components
   EJC/TREX
    103662831 (THOC1)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103662831 (THOC1)
SSDB
Motif
Pfam: efThoc1 Death HsdM_N
Other DBs
NCBI-GeneID: 103662831
NCBI-ProteinID: XP_008688765
UniProt: A0A384C2Y1
LinkDB
Position
Unknown
AA seq 657 aa
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVARKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFASKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLMNALNKSGLSDLAESLTNDNETNS
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgtctccgacgccgccgctcttcagtttgcctgaagcgcggacgcggtttacgaagtct
accagagaggccctgaacaacaaaaatatcaagccattattgagtaccttcagccaatta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcactcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcatctacaccttttgtgttgttgggagatgtt
ttggattgtcttcctttggatcaatgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaacacgttctattctgctgggaaaaattatttactacgtatgtgc
aatgatctccttagaagattatcaaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcaa
tttaatttggaaaatgtcactgttttcaataccaatgagcaggaaagcaccctgggtcag
aagcacactgaggatagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgattacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtacaatgctatgagaagatttcatggaaaactttt
cttaagtattctgaagaagttctagctgtttttaaaagttacaaattagatgatactcag
gcctccaggaaaaagatggaagaattaaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcgtcgacac
atcctgttgcagtatctcattttattccagtatctcaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagacaccaagccgacaagagtagctcgcaagagaacagcaccagag
gacttcctagggaaaggacccaacaaaaagattctgatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataatatggaagcttgcaaatcagagtcaagggaatacatg
ccaactttggaggaattctttgaagaagccattgaacaggcagaccctgaaaacatggtt
gaaaatgaatacaaggctgtgaacaattcaaattacggttggcgagccctgagactatta
gcacggagaagccctcacttcttccagccaaccaaccagcaatttaaaagtttaccagag
tatctcgaaaacatggtaataaagctagcaaaggaactaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagc
cctgatgttcgacgagacaaacctgtaacaggggaacaaatagaggtgtttgccagtaaa
ctgggcgagcaatggaagatcctggccccctacttggaaatgaaagactcggaaattaga
caaattgagtgtgatagcgaagacatgaagatgagagctaagcagctactggtcgcctgg
caagatcaagagggagtacatgcgacacctgagaatctgatgaacgcactgaataagtct
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag

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