Ursus maritimus (polar bear): 121099728
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Entry
121099728 CDS
T03271
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
umr
Ursus maritimus (polar bear)
Pathway
umr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
umr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
121099728 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
umr03400
]
121099728 (LIG4)
Enzymes [BR:
umr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
121099728 (LIG4)
DNA repair and recombination proteins [BR:
umr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
121099728 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
121099728
NCBI-ProteinID:
XP_008683199
UniProt:
A0A384BM47
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASHTSPTVASHVPFADLCSTLERIQRSRGRAEKIRHFREFLDSWRRFHDALHKNQRDV
SDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRGGKDALKLLNYRTPTGTRA
DAGDFATIAYFVLKPRCLQKGSLTIQQVNDILDSIASNNSARRKDLIKKSLLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSVFHNDAAELHNVTTDLEKVCRQLHDPSIGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHRQGDVYQYFSRNGYNYTD
QFGNSPQEGSLTPFIHSAFKTDVQICILDGEMMAFNPSTQTFMQKGNKFDIKRMVEESDL
QTCYCVFDVLMVNNKKLGRETLKKRHEILTSVFTPIPGRIEIVQKTQAHTQKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDILIVGGYWGKGSRGGMM
SHFLCAIAEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKAPPSGILC
GTEKPEVYIEPCHSVIVQVKATEIVSSDMYKAGCTLRFPRIERIREDKEWHECTTVDDLA
QLRGKASGKLASKHLYVGDDDEPQEKKRKAAPKVKKVIGIIEHLKAPNLSNVNKVSNIFE
DVEFCVMSGMDSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKEHFAREYDRYGDSYFVDTDLNQLKEVFSG
IKNSGEQTPGEMASVIAHLEFRYSWDRCPLSMFRQHVIYVDVYAVINDLSTKIEGTRLAV
MGLELRFHGAKVVSHLARGVSHVVVGEDRSRVADLKAFRRTLKRKFKILQQDWVTDSIDK
CELQEENRYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacatacttcgccgactgtcgcatctcacgttccttttgcagacttgtgt
tcaactttagaacgcatacagagaagtagaggacgtgcagaaaaaatcagacacttcagg
gaatttttagattcttggagacgatttcatgatgcccttcataagaaccaaagagatgtc
agcgactccttttatccagcaatgagacttattctccctcagctagaaagagagagaatg
gcctacggaatcaaagaaactatgcttgctaagctttatattgagttgcttaatttacct
agaggaggaaaagacgcacttaaacttttgaattacagaacacccactggaactcgtgca
gatgccggagactttgcaacaattgcatattttgtgttgaaaccaagatgtttgcagaag
ggaagtttaaccatacagcaggtaaatgacattttagactcaattgccagcaataattct
gccagaagaaaggacctgataaagaagagtcttcttcagctaataagtcagagttcagcc
ctggaacaaaagtggcttatacggatgattgtgaaggacttaaaacttggtttcagcgag
cagtctgtattttctgttttccataatgatgctgctgagttgcataatgtcaccaccgat
ctggaaaaagtctgtaggcaactgcatgatccttccataggcctcagtgatatttctatc
actttattctctgcctttaaaccaatgctggctgcgatagcagatattgagcgaatcgag
aaggacatgaaacaccagagtttctacattgaaaccaagctagacggcgagcgtatgcaa
atgcacagacagggggatgtgtatcagtacttctcccggaatggatataactatacggat
cagttcggcaactctccccaggaaggttctcttacaccgttcattcacagtgcattcaaa
acagacgtacaaatctgtatcctggatggcgagatgatggccttcaaccctagcacacag
acttttatgcaaaaggggaataagtttgatatcaaaagaatggtggaggaatctgatttg
cagacttgttattgtgtgtttgatgtactgatggttaataataaaaagctaggacgtgag
accctgaaaaagaggcatgaaattcttactagtgtttttacaccaataccaggtagaata
gaaatagtgcaaaaaacacaagctcatactcagaaagaagtgatcgatgctttgaatgaa
gcaatagataaaagagaagagggaatcatgataaaacaccctctgtctatttacaagcca
gacaaaagaggtgaaggatggctgaagattaaaccagagtacgtggatgggctgatggac
gagctggacatcttaattgtcgggggctactggggtaaaggttcccgaggtgggatgatg
tctcattttttatgtgctatagcagaaaagccgcctcctggtgaaaaaccatccgtgttt
cacactctgtgccgtgttggttccggttataccatgaaggaactgtacgatctgggtttg
aaattggccaaacattggaagccttttcataaaaaagctccacccagtggcattttatgt
ggcacagagaagccagaagtatacatcgagccttgccattctgtcattgttcaagtgaag
gcgacagagatcgtctccagtgatatgtataaagctggctgcacgttgcgttttccaagg
atcgaaaggataagagaagacaaagagtggcacgaatgcaccaccgtggatgacttagcg
caacttcgcgggaaagcgtcgggaaagcttgcgtccaaacacctgtacgtaggtgacgat
gatgagccgcaagaaaagaagcggaaagctgccccgaaggtgaagaaagttattggaatt
atcgagcacttaaaagcacccaacctttctaacgtaaacaaagtttctaatatattcgaa
gatgtggagttctgtgtcatgagcggaatggacagccatccaaagcctgatctggagaac
aggatcgcagaatttggaggttatatcgtccaaaatccaggcccagacacatactgcgtg
attgcagggtccgagaacatcagagtgaaaaacataatttcttcgaataaacatgatgtt
gtcaagcccgagtggctgctagagtgttttaagaccaaaagctgtgtgccgtggcagccc
cgctttatgattcatatgtgcccatcgacaaaggaacattttgcccgtgaatacgatcgt
tatggcgacagttattttgttgatacagatttgaaccaactgaaggaagtgttctcaggc
attaaaaattccggcgaacaaactcctggagaaatggcttctgtgattgcccatttagag
tttcggtattcctgggaccgctgccctctcagtatgttccgacagcacgttatttatgtg
gacgtgtatgctgtcattaatgacttgagtaccaaaatcgaagggacgagattagctgtc
atgggtttggaacttcgatttcatggagccaaggtagtttcccatttagctcggggagtg
tctcacgtagtcgtcggggaggaccggagtcgtgttgcagatttaaaagcttttcgaaga
actcttaagagaaagtttaaaatcctgcaacaagattgggtcactgattccatagacaag
tgtgagttgcaggaggaaaatcgatatttggtttaa
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