Undibacterium piscinae: EJG51_003465
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Entry
EJG51_003465 CDS
T06644
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
upi
Undibacterium piscinae
Brite
KEGG Orthology (KO) [BR:
upi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
upi03400
]
EJG51_003465
DNA repair and recombination proteins [BR:
upi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJG51_003465
Archaeal homologous recombinant proteins
EJG51_003465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
AAA_22
nSTAND3
cobW
RsgA_GTPase
AAA_21
Zn_Tnp_IS1595
SMC_N
AAA_15
DUF87
Motif
Other DBs
NCBI-ProteinID:
QJQ05075
UniProt:
A0A6M4A1M1
LinkDB
All DBs
Position
763729..767748
Genome browser
AA seq
1339 aa
AA seq
DB search
MKILAIRGKNLASLAGEFEVDFEQEPLKSAGLFAISGPTGAGKSTLLDALCMALYENTPR
LIKAGGNKTLPDGNELISQQDAANLLRRGTGEGYAEVDFVGSDVLSYRARWSVRRSRNKA
NGGLQPTSMTLHQLPQLLPIGGKKTEVKAEIEKRVGLKFEQFTRAVLLAQNEFSSFLKAE
DNERGELLETLTGSSIYSQLSMRAFARAKLEQQELQRINDRLADQKPLSEDQRTQLEQDS
QAANTSVAALDARKATLEQDLRWFELDSKLAQEQQQAEQHSQQKHAEQEQAKPRSSALQQ
VEHAQAARPLLAETDRLSRNISAQHSAIADANAKLQQAELHRSQMAAALSSAQLGVQAAE
QAQSQAAPQLDIAKALDASIATLLPAHQAKQAAQRAADLAASQAQEKRDNKQAELSANSQ
KQQATKQWLSQNSALQSLAENWPAWEILLKQASLSRNEINSFNGILATYAQNAEDQSAQL
ASSQTALGLSTEQLVKAEQARQLATLAYQSASTKLSDTPARKQALDTRREQLASAEQITQ
ALAQLHARQTSVQAQAAASALAITHSETAAAQAAAQMPALAGALEQAERALKLAEAACAA
SVESLRAALVAEQPCPVCGSEQHPYRIDNPQLRALLSGLQEQVQQCRQHSQQAQQQHTSN
TAQAASEQKSLELSQLELSQLNQLLQAQQQAWQSHPLATELATELATESATLAKDAEQQS
AWFSQQRSAVQQQLAQITELENASRTALQAKDTAQAAFERATQDQQSKKDAASQAASTLE
QTKAASKNASEQAQQSSQRLALCLAELAPAFRNASADIAVEADWQEQWQAAPEQFQQRCA
EHARAWLSQSKELELSSQRHATLNLELVNLAEAQAKAEQERQRASTEFAASDLVLQDKQA
QRNAILRALKQTELADANGPVLSVSQIEAQFANAIASAKQGLAQHTQTASAAAQEHSRSS
EALAQAQARLASDSAEAGQAATQLVNWLAQNAALFASENSEPDNQAIPEQAATEQLRALL
EHDAAWIAAERAALQALANASQQAAAVAQERSLRRQSHQAERPSLAHLLEQSNAVGGTES
STENSIDLDATNQLAPEQTSEQNHSTVSPISAISEINDQAALAALQQALQSLAAQRQTAN
ASASQLQAAIAQDQARRSQAADIVKLMENQEAKSKIWETLNALIGAADGKKFRNYAQQYT
LDVLLGYANRHLHELSRRYRLQRIKDTLALMVIDQDMGDEARSVHSLSGGESFLVSLALA
LGLASLSSNRVRVESLFIDEGFGSLDADTLRVAMDALDGLQAMGRKVGVISHVQEMTERI
STKILVQRTSGGRSLVGVG
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttagccatacgcggtaaaaacctggcctcgctggccggtgaatttgaagtc
gattttgaacaagagccgctgaaatcagccggtctgtttgcgattagcggccccactggc
gcaggcaagagcaccttgttagatgccctgtgcatggccttgtacgaaaacaccccgcgc
ctgatcaaagccggtggcaataagacgctgcccgatggcaatgagctgatctcgcaacaa
gatgccgccaacctgttgaggcgcggtaccggcgaaggctatgccgaagtggattttgtc
ggcagcgacgttctcagctaccgcgcccgctggagcgtgcggcgctcgcgcaacaaggcc
aatggcggtctgcaaccaaccagcatgacgctgcaccagttgccgcaactattgcctatc
ggcggcaaaaagaccgaggtcaaggccgaaatagaaaaacgcgtaggcctgaagttcgag
caattcacccgcgccgtcttgctggcacaaaatgaattttccagctttttaaaagccgaa
gacaatgaacgcggcgagctgctggaaaccttaaccggcagcagcatctatagccagtta
tcgatgcgtgcgtttgcccgtgccaagctagaacagcaagagctgcagcgcatcaacgac
aggctggcagatcaaaagccactgtccgaagatcagcgcactcagctagagcaagacagc
caggccgccaataccagcgtggccgcactcgatgcgcgcaaagccacgctagagcaagac
ttgcgctggtttgagctagatagcaagctagcccaagagcagcaacaagccgaacaacac
agccagcaaaagcacgccgagcaagagcaagccaagccgcgcagcagtgcgctgcaacag
gtagagcacgcacaggcggcacgccccttgctggcagaaaccgacaggctaagccgcaac
atcagtgcgcagcacagcgcgattgcggatgccaacgccaagttacagcaagccgagcta
caccgcagtcagatggcggcggcgctgtccagcgcccagttaggcgtgcaggcggccgaa
caagcgcaaagccaggctgcgccgcaactcgatattgccaaagcgctggacgccagcatc
gccaccctgctaccggcacaccaggctaaacaagcagcgcagcgcgccgccgatctggct
gcctcgcaggcacaagaaaagcgcgacaacaagcaagccgaactcagcgcgaatagccaa
aaacagcaagccaccaagcaatggttgagccaaaatagcgccctgcaaagcctggcagaa
aactggcccgcgtgggagatactcctcaagcaagctagcctgtcacgcaatgaaatcaac
agttttaacggcatactggccacttatgcccaaaatgcggaagatcagagcgcacaatta
gccagcagccaaaccgcattagggctcagcacagaacagctagtcaaggcggaacaagcg
cgtcagttagccacgctcgcctatcaaagcgccagtacaaagctgagcgacacgcccgcc
cgcaagcaagcgttagacacgcgccgcgagcaactcgccagcgctgagcagatcacgcag
gccctggcgcaactgcatgcgcgccagaccagcgtgcaggcgcaagcggccgccagtgcg
ctcgccatcacgcacagcgagaccgccgccgcgcaagccgccgcccagatgcccgcctta
gccggtgcgctagagcaagctgaacgcgcgctcaaattggctgaagcggcctgcgccgcc
agcgtagaaagcttgcgcgctgcattagtggcagagcagccctgcccggtctgcggatca
gagcaacacccctaccgcattgacaacccgcaattgcgtgccctgctgagcggcttgcaa
gaacaagtacagcaatgccgccagcacagccagcaagcgcagcaacagcacaccagcaat
acggcgcaagcggcgagcgaacaaaaatctttggagctgtctcagctggaactaagccag
ctaaaccagctactgcaagcacagcaacaagcatggcagagccacccgctggcgacggaa
ttagcgaccgagttggccacggaatcggcgaccctggctaaggacgcagaacagcaaagc
gcctggttcagccagcagcgtagcgccgtacaacagcagttagcgcagatcaccgaactg
gagaatgccagccgtaccgcgctgcaagctaaagatacggcgcaagccgcatttgagcgc
gccacgcaagatcagcaaagtaaaaaagacgccgccagccaggccgccagcacgctagag
caaaccaaagccgccagcaaaaacgccagcgagcaagcacagcaaagcagccagcgtctg
gcactgtgcctggcagaactagcccccgctttccgcaacgccagcgcagacattgctgta
gaggcggattggcaagagcaatggcaagccgcacccgagcagtttcagcagcgctgcgcc
gaacacgcccgagcttggctcagccagagtaaagagctagagctgagcagccaacgtcac
gccaccctgaatctggagctagtcaatctggcggaagcgcaagccaaggcagaacaggaa
cgccagcgcgccagcacggaattcgccgccagcgatctggtgctgcaagacaagcaagcg
caaagaaacgccatcttgcgtgcacttaagcaaactgaattagcagacgcaaacggacca
gttctcagcgtcagccagatagaagcgcagtttgctaacgccatcgccagcgccaaacaa
gggctggcgcaacacacgcaaaccgccagtgccgccgcgcaagagcacagccgcagcagc
gaagccttggcgcaagcccaggcgcgcctcgctagcgacagcgcagaagccgggcaagcg
gcaacgcaactagttaactggctagcgcaaaacgccgcgctgttcgccagcgaaaattct
gaaccagacaatcaagcaataccggaacaagcagcgacagagcaactacgcgccctgcta
gaacacgatgccgcatggattgctgccgaacgcgccgcactgcaagcattggccaacgcc
agccagcaagcggccgcagtagcgcaagagcgcagcctgcgcaggcaaagccatcaagcc
gagcgccctagcctggcccatctgctagagcaaagcaacgcagtaggtggtacagaaagc
agcacagaaaacagcatagacctcgatgcgaccaaccaactagcaccagagcaaaccagc
gaacagaatcacagcacggtcagccctatcagcgcaatcagcgaaatcaacgatcaagcc
gccctcgccgccttacagcaagcgctgcaaagcctggcagcacaaaggcaaaccgccaat
gccagcgccagccagctgcaggccgccatcgcacaagatcaggcacgccgcagccaggct
gccgacatcgtcaaactgatggaaaaccaggaagccaagagcaaaatctgggaaaccctc
aacgccctgataggcgcagccgacggcaaaaaattccgcaactacgcgcagcaatacacg
ctcgatgtgttactcggctacgccaatcgccacctgcacgaactatcgcgccgctaccgt
ctgcaacgcatcaaagacaccttagccctgatggtgatagaccaggacatgggcgacgaa
gcccgctcggtgcactcgctctccggcggcgaatccttcctggtctcgctagccttggca
ctaggcctggcatcgctgtcatccaatcgcgtaagagtcgaatcactgttcattgatgaa
ggcttcggcagcctggacgccgacaccctgcgcgtagccatggacgccctagacggcctg
caagccatgggccgcaaagtaggcgtgatctcgcatgtgcaggaaatgacggagcgtatc
tctaccaagattttggtgcagaggacgtcgggtggtaggagtttggtgggggttgggtga
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