Ureaplasma parvum serovar 3 SV3F4: UP3_c0322
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Entry
UP3_c0322 CDS
T03673
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
upr
Ureaplasma parvum serovar 3 SV3F4
Pathway
upr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
upr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UP3_c0322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
upr03400
]
UP3_c0322
Enzymes [BR:
upr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
UP3_c0322
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
UP3_c0322
DNA repair and recombination proteins [BR:
upr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UP3_c0322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
APCDDC
C1_2
Motif
Other DBs
NCBI-ProteinID:
BAO73629
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All DBs
Position
446844..447671
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AA seq
275 aa
AA seq
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MPELPEVQTIVDYLNHHVLDIFIKKTIVHLPKILKNKTPQEFEKLLINHKIVKIKRLGKY
LLFFLSNNLVLSVHLRMEGKFYYQAKEEWFNLAHTHIIIEFNNGMQLRYNDTRQFGTFHI
YEQQSFLDSKELKKIALDPLDNNFSAQYLYEKLKKSNKAIKTALLDQSVVSGIGNIYADE
ILFAAKIFPTILAKNLTLKNYEKITKEAQRILLLSIKNKGTTIHTYKFGNDETGLFQKML
LVHTHAKEPCQICGTIIQKTKVNGRGTYYCPNCQN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctaccagaagtacaaacgattgttgattatttaaatcatcatgttctcgat
atttttattaaaaaaactattgttcatttacctaaaattttaaaaaataaaacaccacaa
gaatttgaaaaactgttaattaatcataaaatagtcaaaattaaacgtcttggtaaatat
ttattattttttttaagtaataatttagtattaagtgtacatttgcggatggagggaaaa
ttttattatcaagcaaaagaggaatgatttaatttagcacatactcatattattattgaa
tttaataatggtatgcaattaagatataatgatacgcgtcaatttggaacttttcacatt
tatgagcaacaatcttttttagattcaaaagaattaaaaaagattgctttagatccgcta
gataataatttttcagcgcagtatttgtatgaaaaattaaaaaaaagtaataaagccatt
aaaacagccttgttagatcaatctgttgtttcaggaattggtaacatttatgctgatgaa
attttatttgcagctaaaatttttcctacaatattagctaaaaatcttactttaaaaaat
tatgaaaagatcacaaaagaagcacaacgaatcttattattatcaattaaaaataaagga
acaacaatccacacttataaatttggtaatgatgaaacaggtttgtttcaaaagatgtta
ttagttcacacacacgctaaagaaccatgccaaatttgtggaacaattattcaaaaaaca
aaggtcaacggtcggggaacttattattgtccaaattgtcaaaactaa
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