KEGG   Ureaplasma parvum serovar 3 SV3F4: UP3_c0322
Entry
UP3_c0322         CDS       T03673                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
upr  Ureaplasma parvum serovar 3 SV3F4
Pathway
upr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:upr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    UP3_c0322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:upr03400]
    UP3_c0322
Enzymes [BR:upr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     UP3_c0322
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     UP3_c0322
DNA repair and recombination proteins [BR:upr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     UP3_c0322
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Auto_anti-p27 APCDDC C1_2
Other DBs
NCBI-ProteinID: BAO73629
LinkDB
Position
446844..447671
AA seq 275 aa
MPELPEVQTIVDYLNHHVLDIFIKKTIVHLPKILKNKTPQEFEKLLINHKIVKIKRLGKY
LLFFLSNNLVLSVHLRMEGKFYYQAKEEWFNLAHTHIIIEFNNGMQLRYNDTRQFGTFHI
YEQQSFLDSKELKKIALDPLDNNFSAQYLYEKLKKSNKAIKTALLDQSVVSGIGNIYADE
ILFAAKIFPTILAKNLTLKNYEKITKEAQRILLLSIKNKGTTIHTYKFGNDETGLFQKML
LVHTHAKEPCQICGTIIQKTKVNGRGTYYCPNCQN
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccagagctaccagaagtacaaacgattgttgattatttaaatcatcatgttctcgat
atttttattaaaaaaactattgttcatttacctaaaattttaaaaaataaaacaccacaa
gaatttgaaaaactgttaattaatcataaaatagtcaaaattaaacgtcttggtaaatat
ttattattttttttaagtaataatttagtattaagtgtacatttgcggatggagggaaaa
ttttattatcaagcaaaagaggaatgatttaatttagcacatactcatattattattgaa
tttaataatggtatgcaattaagatataatgatacgcgtcaatttggaacttttcacatt
tatgagcaacaatcttttttagattcaaaagaattaaaaaagattgctttagatccgcta
gataataatttttcagcgcagtatttgtatgaaaaattaaaaaaaagtaataaagccatt
aaaacagccttgttagatcaatctgttgtttcaggaattggtaacatttatgctgatgaa
attttatttgcagctaaaatttttcctacaatattagctaaaaatcttactttaaaaaat
tatgaaaagatcacaaaagaagcacaacgaatcttattattatcaattaaaaataaagga
acaacaatccacacttataaatttggtaatgatgaaacaggtttgtttcaaaagatgtta
ttagttcacacacacgctaaagaaccatgccaaatttgtggaacaattattcaaaaaaca
aaggtcaacggtcggggaacttattattgtccaaattgtcaaaactaa

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