Undibacterium parvum: EJN92_12290
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Entry
EJN92_12290 CDS
T05754
Name
(GenBank) autotransporter domain-containing protein
Organism
upv
Undibacterium parvum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Autotransporter
Big_3_5
Big_2
Motif
Other DBs
NCBI-ProteinID:
AZP12712
UniProt:
A0A3S9HKS4
LinkDB
All DBs
Position
2800814..2805691
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AA seq
1625 aa
AA seq
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MQMQAVTSAQKLFALFTQVFLHSLSRYSGWKSLTDTRTRMKAVWLTLLMLFSMAGSSLAY
AAAPPTSCTINITNTGASSYTYNYTNQDLTNCDPGVHGMGSGGGVFTDSNGNTGAIGTNA
GGNFLPNNAMTINYNGFKYTPPSIGYTGNDTVVIYYQDQLSAEFGQVTLTIHVTGGATAP
GAPTSVSATPGNTSASVSFTAPGSNGGAIITGYTVTSSPGGITATGASSPINVTGLTNGT
AYTFTVTATNSAGTGSASVASSAVTPRTVPGAPSGVSATAASTTASVSFTAPASNGGATI
TGYTVTVVETGATFVGASSPISVTGLTNGTAYTFTVKATNSAGTGTASAASTAVTPKTAQ
TITFNNPGSQNFGTTPTLSASASSTLPVTFTSATTGVCTVSGSTLTFVTAGNCTINANQG
GNSTIYAATQVQQSFTVNAIVPGAPAAPTATAGDTTASVSFTVPASNGGSAITGYTVTVV
ETGATFVGASSPISVTGLTNGTAYTFTVKATNSAGTGTASTASTAVTPKAAQTISFNNPG
SQNFGTTPTLSASASSTLPVTFTSATTGVCTVSGTTLTLVTAGTCTINANQAGDAAYGAA
TQVQQTFAIAAVVPGVPTAASATAGNTSATVTFTAPAFIGGAAITGYTVTVSPGGATFSG
GASPINVTGLTNGTAYTFTVKATNSAGTGTASSASAAVTPQVGQTIIFINPGSQNFGTTP
TLSASASSTLPVTFTSATTGVCTVSGTTLTLVTAGTCTINANQAGDAAYVAATQVQQTFA
IAAVVPGVPTAASATAGNTSATVTFTAPAFIGGAAITGYTVTVSPGGATFSGAASPINVT
GLTNGTAYTFTVKATNSAGSSSASAASGAITPKASQTISFTAPVTGVVGGVVNVTATASS
GLPVSFSSVTLPVCTVTGSSVNLIAAGTCTINADQVGNASFPAATQVSRSFTVGSTPVPL
LNFTQAGPLQINLGNNLNNAVSSSLSGGSYGAISYSSSNAAVATVDASGKVTPVAAGGVV
ITATQAAVTGINAQTTQSYSLTVGKNVQAALTLTADKLAIIKVTGKATLTASGGSGSGAI
SFAVSSGACSLSGNVLSAGSTAGNCVVTATKDADANFSAVSASITIQIQNLTAASVTIGT
TQSQVLDGVPVTLTAAVTPAAATGTISFMDGTVTLATITLTNGSALLVAKNLAIGVHTIN
AVYSGDAVTAPGNSVGITVTVGKRPDPTVDSVVKKTAVAAANISQRFTQAQMTNIYSHVQ
VLHHDFSIKNRFGISFSAPDLDMFRMAANKISENLTANKGSFGNDLYRLNPDDVRQAKAP
FAKDEAAHKLMDSEEEAPKNDEWFQIAGKPVGMWTAGNIDFGGIDAPDGSRTKFSSSGLT
IGMDMMWSPKLIVGLSVGYARDKATMDNFGSESKSKQWSGVLYGTYKPEKEWFIDGMGGI
GKLNYDNHRWDDVNSQLLAGERTGQVSFMSLTLTRDLKVDKDLHIQPFGRFDVLHTKLDT
NTERGSVLALTLNNTSSVTTAFTGGLNFAKDFYLDFGQVTPSLKLQWRHRTSGEMNQSMY
YTDLGAGSTNYNVLVVGLPEDIQSVGLGLNVISRRGITTNFSWLGSMGAHTYRANSFRVD
FRLGF
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgcaagcagtcacctcagcccaaaaactcttcgccctgttcacgcaagttttc
ttgcattccctgtccagatattcaggatggaaatccttgacagataccaggacacgcatg
aaagcagtctggctcacattgctgatgctgttcagcatggctggttcaagcttagcttat
gcagcagctccaccaacttcttgtaccatcaacatcaccaataccggtgcatccagttat
acatacaattatacgaatcaagatttaacgaattgcgatcccggcgtgcacgggatggga
tcgggcggcggcgtattcaccgattcaaacgggaataccggtgcaattggtacgaatgcc
ggagggaactttcttccgaataacgcaatgaccatcaactacaatggttttaaatatacg
cctccaagcatcgggtataccggtaacgatacagtggtcatttattatcaggatcaactg
tcggctgagtttggtcaggttactttgaccatacatgtgactggcggtgcgactgctcca
ggcgcaccaaccagtgtgagcgcaacaccgggtaatacatcagcctcagtcagcttcacg
gcgccaggctcgaatggcggtgcaatcatcaccggctatacggtaacctccagccctggc
ggtataacagcgacaggggcatccagcccgatcaatgtgaccggcctgaccaacggcacg
gcctacacatttactgtgaccgcgaccaattcggctggaacgggcagtgcgtcggttgca
tcgtcagcggtgacaccaagaacggtaccgggtgcgccaagcggcgtgagcgcgaccgcg
gcgagtaccaccgccagcgtcagctttacggcaccggcatcgaatggtggtgcgaccatc
accggttacaccgtgaccgtggtggagactggcgcgacctttgttggtgccagcagcccg
atcagtgtgacgggtctgaccaatggtacggcctatacctttaccgtcaaagcgaccaat
agcgcaggtaccgggacggcgtcagctgcatcaacggcagtgacaccaaagacagcacag
accattaccttcaataatccaggcagccagaactttggtacgacaccaacgctgagtgcc
agcgccagctcgactttgcctgtgacttttaccagcgccacgaccggcgtgtgtactgtc
agcggcagcaccctgactttcgtgacagcaggtaactgtacgatcaatgcgaatcaggga
ggtaatagcactatttatgcagcaacgcaggtacagcaaagctttactgtcaacgccatc
gtaccgggtgcaccggctgcgccaacggcgacagcgggtgatactaccgccagtgtgagc
tttacagtaccggcgtcgaatggtggttcagcgattaccggttacaccgtgaccgtggtg
gagactggagcgacctttgttggtgccagcagcccgatcagtgtgacgggtctgaccaac
ggtactgcgtatacgtttacagtaaaggcaaccaacagcgcgggcacaggcacggcgtcg
accgcttcgacggcagtcacaccgaaagccgcacagactattagcttcaataatccaggc
agccagaactttggtaccacgccgacgctgagtgccagcgccagctcgactttgccggtt
acttttaccagcgctacgaccggtgtgtgtaccgtaagtggtactacactgacgctggtc
acggctggcacttgtaccattaatgcgaatcaggctggtgatgccgcctacggtgctgca
acccaggtacagcagacgtttgcgattgccgccgtggtaccaggcgtaccaacagctgcc
agtgcaacggcaggaaatacatcagcaacggtcacattcaccgctccggcatttatcggt
ggcgcagccatcaccggctataccgtcaccgtgagtccggggggcgcgacctttagcggt
ggagcgagtccgatcaatgtgacggggctgactaacggtacagcgtataccttcaccgtt
aaagcgactaacagcgccggtaccggcacggcatcaagtgcatcggccgcagtgacaccg
caagtcggacagaccattatttttatcaatcctggcagccagaactttggtacgacaccg
acgctgagtgctagcgccagctcgactttaccggttacttttaccagcgctactaccggt
gtgtgtaccgtcagtggcacaacactgacgctggtcacggctggcacttgtaccatcaat
gccaatcaggctggtgatgccgcctacgttgctgcaacccaggtacagcagacgtttgcg
attgccgccgtggtaccgggcgtaccaacagctgccagtgcaacggcaggaaatacatca
gcaacggtcacattcaccgctccggcatttatcggtggcgcagccatcaccggctatacc
gtcaccgtgagtccgggtggcgcgaccttcagcggtgcagcgagtccgatcaatgtgacg
ggtctgactaacggtacagcgtataccttcaccgtaaaagcgaccaacagcgcaggtagt
agcagtgcatcggctgcatccggcgcgatcacacctaaagctagccagacgatcagcttc
accgcaccggtaactggcgtcgtgggtggcgtggtgaatgtgacggcaacggccagttcc
ggtttgccggtcagctttagttctgtgactttaccggtttgtacagtgacaggctccagc
gtaaatctgatcgcagcgggtacatgtacgatcaatgcagatcaagttggtaatgcaagc
ttcccagctgcaactcaggtcagccgttctttcacggtgggttctacgcctgtaccattg
ctgaatttcactcaggccggtcctttgcaaatcaatttaggtaataacctgaacaatgcc
gtgagctcaagcctgagcggtggcagctacggtgcgatcagctacagcagcagcaatgca
gctgtagcgaccgtagatgcaagcggtaaagtaacaccagttgccgcaggcggcgtcgtg
atcactgcgacccaagctgctgttaccggcatcaacgcccagactacccagtcttacagt
ctgacggttggtaaaaatgtgcaagctgcactcacgctgacagcagacaaactggcgatt
atcaaagtcacaggtaaagccacgttgactgcatccggtggttcgggcagcggcgcaatc
agtttcgccgtcagctccggtgcctgcagtttgtctggcaatgtcctgtcggctggcagc
acagcaggcaattgtgtggtgactgcgaccaaagacgctgatgcgaatttcagtgcggtc
tcggccagcatcacgatacagattcagaatctgaccgcagccagcgtaacgataggtact
acgcagtctcaggtattggatggggtgccagtcacactgacggcagcggttacaccggct
gctgctaccggtaccatcagttttatggatggaacggtgaccctggcaacgatcacactg
acgaatggttcagccttgctggtcgcgaaaaacctggccattggtgttcataccattaat
gcggtgtattcgggtgatgcggttactgcgccaggtaatagtgtaggcattacggtgacg
gtgggtaagcgtcctgacccaacggttgactcagtggtgaaaaaaacggcggtcgcggca
gcaaatatcagtcagcgcttcactcaggcacagatgacgaatatttacagccacgttcag
gttctgcaccatgacttttcgatcaagaatcgttttggtatcagctttagtgcaccggat
ctggatatgttccgcatggcggccaacaaaatctctgaaaacctgactgcgaataaaggc
agcttcggcaacgatctgtatcgactcaatccggacgatgtacgtcaggccaaggcaccg
tttgccaaagatgaagccgcgcataaactgatggacagtgaggaagaagcgcctaagaat
gacgagtggttccagatcgcaggtaaaccagtcggcatgtggactgcggggaatatcgac
tttggcggtatcgatgccccagatggcagccgtaccaagttctccagctcgggtctgact
atcggtatggatatgatgtggagtccgaaactgatcgttggtctgtccgtcggctatgca
cgcgataaggccaccatggataactttggcagtgaaagtaaatccaagcaatggtcgggt
gtgttgtacggaacttataaaccggagaaggagtggtttattgatggcatgggtggtatc
ggtaagctcaattacgataatcaccgctgggatgacgtgaatagtcagctgttggctggt
gagcgtaccggacaggtcagtttcatgtcgctgacgctgacccgtgatctgaaggtcgat
aaagatctgcatatccagccattcggacgcttcgatgtattgcataccaaactggatacg
aacacagaacgcggcagcgtgctggcactgacactgaataacaccagcagtgtgacgacg
gcatttaccggtggtctgaacttcgccaaagatttctacttagactttggccaggtaaca
ccatcgctgaaactgcaatggcgtcaccgtaccagcggtgaaatgaaccagtctatgtat
tacacggatctgggggcaggtagtaccaactacaatgtactggtagtcggtttgccggaa
gacatacagtctgttggtctgggactgaatgtgatatcgcgccgtggcataacgaccaac
ttcagctggctgggttctatgggtgcccacacctatcgtgccaacagcttccgggtggat
tttcgactcgggttctga
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