KEGG   Uncinocarpus reesii: UREG_02634
Entry
UREG_02634        CDS       T01132                                 
Name
(RefSeq) hypothetical protein
  KO
K12878  THO complex subunit 1
Organism
ure  Uncinocarpus reesii
Pathway
ure03013  Nucleocytoplasmic transport
ure03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    UREG_02634
  09122 Translation
   03013 Nucleocytoplasmic transport
    UREG_02634
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ure03019]
    UREG_02634
   03041 Spliceosome [BR:ure03041]
    UREG_02634
Messenger RNA biogenesis [BR:ure03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     UREG_02634
Spliceosome [BR:ure03041]
 Complex C
  Other components
   EJC/TREX
    UREG_02634
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    UREG_02634
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 8443079
NCBI-ProteinID: XP_002543118
UniProt: C4JH61
LinkDB
AA seq 756 aa
MAVGDIRSVQVYRKHVQELLEKATEVKQSSAIEPPVTESDLGDAIRWIDDDGEDASKSAQ
AAYAAVETAFREKFYRLLATTSINEPNFVDIWNLLDIVSIFSDNERCEPGLIFWLVEELL
DSQTIDGCRKVFDYLESRRERNTASFPLGDKSSVNLRGEYHTENITTFDELPTSASAEED
AADVEMRDAEPPKALEDSTKLETATNLQTSAEPDGQRRKPSTATPSQTEDASIDMDALYP
IFWGLQASFSSPTRLFDPEHFASFKKGLESTISNFQKVSIDLEKRGMTKGSEETSRRGIK
RKRTENGSEAANTFNPKYLTSRDLFELEANDVAFRRHILVQSLIILDFLISLTPRAKAKL
ADATNKSVLYSYVLSDEDAKWATQMKSSIAGYLQQGLDGKFYYRMVDTVLTRDKNWVRWK
AEACPAIEKAPIQVQEYLDTQSGVMKLTTNKRLRATPLGSLDLKFLSEDANLGNLDRLRE
ADRFSNPSPDSYMRGIADDEFNIEMAQNDDEKEEAARGKASKAWRVLRLSSRSKLNKFDK
IDDGKNLKILFESPPPEKPGSEVEGGEGQEIGSVKNESTKENDTVEGDSLARHAANLTHP
GTKNHQKLVPASSPSLAAHQRCRCFKSILSAAKDERSKQGLSLVSRSSSRLQLGYVISAS
CAPEMIGNYVFSSFISENFTRHLSHSWAREELWADSLHITPIGQISLFDCFGPMDDRCRR
SGEDVFGDDIVPLSTDPAIWSLSLSGINSVHVDSGS
NT seq 2271 nt   +upstreamnt  +downstreamnt
atggccgttggggacattcgctcagtccaggtctaccggaaacacgttcaagagcttcta
gagaaagcaacggaggtgaagcaaagctccgcaatcgagcctccagtcacagagtctgac
ttgggggacgcgatccgttggattgacgacgacggagaagatgcatccaagagcgcccag
gcggcgtacgcagcggtagagactgcctttcgggaaaaattctatcgtctgttggctaca
acgtccataaatgaacccaactttgtcgacatatggaatctccttgacatagtgtcgata
ttctccgacaacgaacgatgcgaacccgggcttatcttctggctcgtggaggagcttctt
gatagccaaaccatcgatggctgccgcaaggtgtttgattacctagaatccaggcgcgag
cgtaatacagcttcattccctttgggggacaagagttcagtgaatttaagaggagaatac
catacagagaatatcacaaccttcgatgaacttccaacatcggcatcagcggaggaagat
gctgcagacgtggaaatgagggatgcagaaccgccaaaggctctagaagactccacaaaa
ttagagacagccacgaatttacaaacttctgctgagcctgacggacaacgccgcaagcca
tccacagcaaccccaagccaaacagaagatgcatcaattgatatggatgctctttacccg
atattttgggggctgcaagcgagtttttcgtcacccacgcgactttttgatccagaacat
ttcgcctccttcaaaaagggtctcgaatctaccatttcaaactttcagaaggtcagcatt
gatttagagaaacgtggaatgacaaagggatcggaggaaacttcgcgacgtgggataaaa
cggaaacgtaccgaaaacggatccgaggctgcaaatacgttcaacccaaaatatctaacc
agtcgggatttgttcgaactagaggccaatgacgttgcattccgaaggcatattcttgtc
cagtccctgatcattcttgacttcctgatttcgctcacaccgagagcgaaagcaaagctc
gcagacgctacaaacaaatctgttttatacagctatgttcttagtgatgaggatgcaaaa
tgggcaactcaaatgaagtcatcgattgcaggctacttgcaacaggggttagacgggaag
ttctattatcgcatggttgatactgtcttgacgagggataaaaactgggtccgttggaag
gcagaggcatgcccggctattgagaaggctccaattcaagttcaggaatacctggatacg
caatctggtgttatgaaattaacgacaaacaaacggctgcgagcgacaccactaggatca
ctagatcttaaatttttgtcagaggatgccaacctaggcaatctagatcggcttagagag
gcagacagattctcaaacccatcacccgattcgtacatgcggggtatcgccgatgatgaa
ttcaatatcgagatggcccaaaatgatgacgagaaggaagaagctgccagaggaaaggca
agcaaggcgtggagagtcttgcggctatcctcccgcagtaagttaaacaagttcgataaa
atcgacgatgggaaaaacctcaaaatcctctttgaaagcccacctcctgagaagccaggt
tcggaagtggaaggaggtgaaggtcaagaaattgggtcggtgaaaaatgagtcaacgaaa
gagaacgataccgttgaaggggactcgctcgcaaggcacgccgcaaatttgacgcatcca
ggcacgaaaaatcatcaaaagctcgttccagcttcatcgccgtccctagcagcgcaccag
agatgtcgatgttttaagtctattttaagcgctgccaaagatgagcggtctaagcagggc
ctttccctcgtgtctcggagctctagtagactgcagttaggctatgtcatctcggcgtct
tgtgcccctgagatgatcggaaattatgtattctccagtttcatctccgagaacttcact
cgacaccttagccacagttgggcgagagaggaattgtgggcagattcgttgcatattact
ccaattggccagatatcgctctttgactgctttggccccatggatgacaggtgtcgtcgt
agtggcgaggatgtgtttggcgacgacatcgtccccctgtcgacggaccccgcgatttgg
tctttgagcctttcgggtattaactccgtgcacgtcgactctggttcttga

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