Uncinocarpus reesii: UREG_04075
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Entry
UREG_04075 CDS
T01132
Name
(RefSeq) suppressor of stem-loop protein 1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ure
Uncinocarpus reesii
Pathway
ure03022
Basal transcription factors
ure03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
UREG_04075
09124 Replication and repair
03420 Nucleotide excision repair
UREG_04075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ure03021
]
UREG_04075
03400 DNA repair and recombination proteins [BR:
ure03400
]
UREG_04075
Transcription machinery [BR:
ure03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
UREG_04075
DNA repair and recombination proteins [BR:
ure03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
UREG_04075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
DZR_2
Tfb4
DZR
Motif
Other DBs
NCBI-GeneID:
8444778
NCBI-ProteinID:
XP_002544558
UniProt:
C4JML7
LinkDB
All DBs
AA seq
413 aa
AA seq
DB search
MADSDEEYVAEFDSEDHDDDLGEDDEDDEPDTRNVIPGKSSRRRGKRKKQREGHELLRDT
TPLQRGIIRHLILVLDLSIAMTEKDLRPTRYLLTLRFAQEFVLEYFEQNPISQLGIIGMR
DGLAVKISDMSGNPTEHILALQALRAKDPNGLPSLQNALEMARGTLFHTPSHGTREVLIL
FGALLSSDPGDIHQTVSSLISDKIRVGVVGLAAEVAICREICAKTNAGDDSGYGVALNEQ
HFRELMMETTTPPVTYSKKQAANSLLMMGFPSRTVEPAPSMCACHSMPSRGGYLCSRCGS
KVCTLPAECPACGLTLILSTHLARSYHHLFPLINWIEVPWKKASTSANCFACGNPFPAVP
PRAQWEARENMAKGMSFSKRCIYLASGNLEGTFAVARSSYKLQQEVWMQTVQT
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcggacgaagaatacgttgcagaattcgattccgaagaccacgatgacgat
cttggtgaagacgacgaggacgatgaaccagacacccgcaacgtgatccccggaaagtcc
agtcgccgtcgcggcaagcggaaaaaacaacgcgagggacatgagttactgagagacaca
actcctcttcaacgtggaatcatacggcatctgattttggtcttggatctatcgatcgcc
atgacggaaaaggaccttcgacccacgcgctaccttcttacccttcgtttcgctcaggaa
tttgttcttgaatattttgaacagaacccgatctcccagctcggaataataggcatgagg
gatggcttagcagttaagataagtgatatgagtgggaatcctaccgagcacatcctagcg
ctccaagctctgagagcaaaagacccaaacggcctcccaagtttgcaaaatgcccttgaa
atggctcgcgggacactctttcatacaccaagccatgggacccgcgaagtcctgatatta
ttcggcgctctcctttcatctgacccaggcgacattcaccaaaccgtctcatccctcatt
tccgataaaatacgcgtcggggtcgttggcctcgcagctgaagtagccatatgccgggag
atatgcgccaaaactaatgccggcgacgatagtggctatggcgtagcgctcaacgagcag
cattttcgggagctaatgatggaaaccacaaccccgcctgttacctattccaagaagcag
gccgcaaattcccttctgatgatgggattcccctcccgcaccgtggaacccgctccatct
atgtgtgcttgccattcaatgccgtcccggggtggctatctttgttccagatgcggaagc
aaagtctgcaccttgcctgcggaatgtccagcatgtggactgacactgattctttccacg
catttggctcgttcgtaccaccacctattccccttgattaactggatcgaggttccttgg
aagaaagcctcgactagtgcgaattgctttgcctgtggtaaccctttccccgcggtgcca
ccccgtgcccaatgggaagcgcgtgagaacatggccaagggaatgtcgttcagcaagcgc
tgcatttatctggcgtctgggaatctggagggcacattcgctgtcgcacgttcttcatat
aaactgcaacaggaggtgtggatgcaaacagtgcaaacatag
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