Uncinocarpus reesii: UREG_04759
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Entry
UREG_04759 CDS
T01132
Name
(RefSeq) ATP-dependent RNA helicase ded1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ure
Uncinocarpus reesii
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ure03019
]
UREG_04759
03041 Spliceosome [BR:
ure03041
]
UREG_04759
03036 Chromosome and associated proteins [BR:
ure03036
]
UREG_04759
Enzymes [BR:
ure01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UREG_04759
Messenger RNA biogenesis [BR:
ure03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
UREG_04759
mRNA cycle factors
Common to processing body (P body) and stress granule
UREG_04759
Spliceosome [BR:
ure03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
UREG_04759
Chromosome and associated proteins [BR:
ure03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
UREG_04759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
8440096
NCBI-ProteinID:
XP_002584070
UniProt:
C4JUF6
LinkDB
All DBs
AA seq
670 aa
AA seq
DB search
MAESLKMAGLSLEDSQHAPNHATGRAPYIPPHLRGQQQRGPVPMDGPAPQARAPMPSGSF
AANGAPNNWAPRGANVNGAPGWNAGSAPRFDPNAYGHPGPRGGQNYGGAGSAPSAGAARG
SGDGQWRDGKHVPGPANARLERELFGVPNDPTKQHTGINFANYDDIPVEASGHDVPEPVT
TFTNPPLDDHLISNIKLASYKTPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILS
QAFKNGPSAVPTQNANQFSYGRQRKAYPTSLILAPTRELVSQIYDEARKFAYRSWVRPCV
VYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEP
QIRRIVEGEDMPPVNGRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKV
EYVEDNDKRSVLLDILHTHGTGLTLIFVETKRMADSLSEFLINQNFPATAIHGDRTQRER
ERALEYFRNARCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGRAGNTGL
STAFFNRGNRGVVRDLIELLKEAHQEVPAFLENIAREGSGYGGRGGGRGGGRGRGSNTRD
MRRMGGGAPPSMGSAPSYGGSYGGGTNNYSSGGSFGGAPSYGGGYSGGGGSYGGGSYGNP
SGPTGPSSWW
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatctctgaaaatggccggcctctcccttgaggactctcagcatgctccaaac
cacgccactggacgggctccctatatccctccccatctccgtggccagcagcaacgcggt
cccgtccccatggatggtcccgcgccgcaagctcgtgctcccatgccctctggttccttt
gctgcaaatggtgctcccaacaactgggccccgcgtggagctaatgtgaacggtgctcct
ggctggaatgctggcagcgcacctcgcttcgacccaaatgcatacggccatcctggtcct
cgtggcggccagaactacggtggtgctggcagcgctcctagtgctggtgccgctcgcgga
tctggtgacggtcagtggcgcgatggaaaacacgttcccggccctgccaatgcccgcctc
gagcgtgaactcttcggtgtccccaacgacccaaccaaacagcacactggcatcaatttt
gccaactacgatgatatccctgttgaggcctccggtcacgacgttccagagccagtgaca
acattcacaaacccacccttggacgaccatttgatatcgaacatcaagcttgccagctac
aaaaccccaactccggtgcaaaaatactccattccgatcgtcatgggtggtcgcgatctg
atggcctgtgctcagaccggctccggaaagaccggtggtttcctgttcccaatcctgtcc
caagctttcaagaatggtccttctgccgtcccaacccagaatgccaaccagttcagctat
ggccgccagcgaaaggcgtaccccacttctttgatcttggccccaacccgtgagttggtc
tctcagatctacgacgaagcccgcaagtttgcttaccgctcctgggttcgcccatgtgtc
gtctacggtggcgcggacattggatcccagcttcgccagattgaacgcggctgtgacctg
ctcgttgccactcctgggcgtctcgtggatctaattgagcgtggacgcatttccctctgc
aatatcaaatacctcgtcctcgatgaagctgatcgcatgttggacatgggtttcgagcca
cagattcgccgtatcgttgagggggaagatatgccacctgtcaatggccgtcaaacactc
atgttctctgccacattccctcgcgacatccagatgctcgcccgtgactttttgaaggac
tatgtcttcttgtccgttggtcgtgttggctccacttcggagaacattacccaaaaagtt
gagtacgtcgaggataacgacaagcgttccgtccttctcgacattcttcacacccatgga
accggcctgacgctgattttcgtcgaaaccaaacgcatggccgattcgctttccgagttc
cttatcaaccaaaactttcccgccactgccatccacggtgaccgcactcaacgtgagcgt
gagcgtgctcttgaatatttccgaaatgctcgctgccccattctggttgcgactgcagtg
gctgctcgtggcctcgatatccccaacgttacccatgtcgtcaactacgatctgccaacc
gatattgacgattacgtgcatcgtatcggtcgtaccggtcgtgcaggtaacaccggcctg
tccaccgctttctttaaccgtggcaaccgaggtgtcgtccgtgacttgatcgaattgctc
aaggaagcccatcaagaggtcccggcgttcttggagaacatcgctcgtgagggcagtggg
tatggcggtcgtggcggcggtcgtggtggaggccgaggccgtggctcaaacactcgggat
atgcgacgcatgggtggtggtgccccaccatcgatgggcagtgctccttcctatggtggc
agttatggcggtggtaccaacaactatagcagcggcggtagctttggcggcgctccatca
tacggtggtggatacagcggcggcggcggcagctatggaggcggcagctacggcaaccca
tccggccctaccggtccatcatcttggtggtaa
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