Variovorax sp. PAMC 28711: AX767_11845
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Entry
AX767_11845 CDS
T04325
Name
(GenBank) glycogen-branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa00500
Starch and sucrose metabolism
vaa01100
Metabolic pathways
vaa01110
Biosynthesis of secondary metabolites
Module
vaa_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
AX767_11845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vaa04147
]
AX767_11845
Enzymes [BR:
vaa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
AX767_11845
Exosome [BR:
vaa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AX767_11845
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase_C
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
AMM24977
UniProt:
A0A126ZD87
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All DBs
Position
complement(2414573..2416744)
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AA seq
723 aa
AA seq
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MPTLTAPETQALMRAEHGDPFAVLGLHETPQGLVVRALMPGARSVAALHSRTGWPLAVLE
REHDSDVFSALVPAAQARLGYSLQVDWGSHSSELQDPYRFPPVLGDTDVWLLAEGTHLRP
WERLGAHLRELDGVKGVAFAVWAPNARRVSVVGDFNNWDGRRHAMRFRPECGVWEIFAPH
VATGDAYQFEILSAQGEVLRKADPFAFSARLRPDTACVVAPLPPAVALPAGRAEANARDA
PISIYEVHLGSWERKNNGQDWLDYSELADTLVPYARDMGFTHIELMPVTEHPFDGSWGYQ
PIGLYAPTSRFGTPGDFRYFVAVAHAAGLGVILDWVPAHFPTDAHGLGTFDGTPLYEYAD
PREGFHNDWKTLIFNYGRNEVRNYLVGNALYWLERYGIDGLRVDAVASMLYRDYSRAPGQ
WIPNAHGGRENLEAIDFLRRMNHVVGVERPGAVTIAEESTSFPGVTRPPEDGGLGFHYKW
NMGWMNDTLAYAGTDPVHRKHHHQKITFGLMYAHDENFVLPFSHDEVVHGKGSMIGRMPG
DDWQKFAGLRNLYGYLWAYPGKKLLFMGNEFAQVTEWNADRSLDWHLLDHEGLHRGVSRL
VRDLNNVYRHFPALYQQDSEGDGFEWIVHDDVDQSVFAFVRRAKDGSFVIAVCNFTPVVR
PAYRLGVPAAGSYREIINTDSATYGGSGVGNGVVASTAHGCHGKADSICIDVPPLGTVMW
VLA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgctgaccgcccccgaaacccaagcgctgatgcgcgccgagcatggcgatccc
ttcgccgtgctcggcctgcatgaaaccccccaggggctggtggtgcgggccctgatgccc
ggcgcccgcagcgtggccgccttgcacagccgcaccggctggccgctggccgtgctggag
cgggaacacgattccgacgttttcagcgccctcgtgccggcggcgcaggcgcgcctgggc
tattcgctccaggtcgactggggctctcacagctcggaactccaggatccgtaccgcttt
ccccccgtgctcggcgacaccgacgtgtggctgctggccgagggaacgcacctgcgcccg
tgggagcgactgggcgcacacctgcgagagctggacggcgtcaagggcgtggcctttgcc
gtgtgggcgccgaacgcgcgccgcgtctcggtggtcggcgatttcaacaattgggacgga
cggcgccatgcgatgcgctttcgcccggagtgcggcgtctgggaaatattcgcgccgcac
gtcgcgaccggcgacgcgtaccagttcgaaatcctgtcggcgcagggcgaggtgctgcgc
aaggccgatccgttcgcgttctcggcccggctgcgccccgacaccgcctgcgtcgtggcg
ccgctgccgcccgccgtggcactgccggcaggccgcgccgaagccaacgcccgcgacgcg
ccgatcagcatctacgaggtgcatctcggctcgtgggagcgcaagaacaacgggcaggac
tggctcgactacagcgagctggccgacactctcgtgccctacgcgcgcgacatgggcttc
acgcacatcgagctcatgccggtcaccgagcatccgttcgacggctcgtggggttaccag
ccaatcggcctctacgcgccgacctcgcgcttcggaacgccgggcgacttccgctatttc
gtcgcggtggcgcatgccgccggactcggcgtgatcctcgactgggtgcccgcgcacttt
ccgaccgacgcgcacggcctcggcaccttcgacggcacgccgctctacgaatacgccgac
ccgcgcgaaggcttccacaacgactggaagacgctcatcttcaactacggtcgcaacgaa
gtgcgcaactacctcgtgggcaacgcgctgtactggctggagcgctacggcatcgacggt
ttgcgcgtggacgccgtcgcgtcgatgctgtatcgcgactacagccgcgcgccgggccag
tggattccgaacgcgcacggcgggcgcgaaaacctggaagcgatcgacttcctgcgccgc
atgaaccacgtggtcggggtcgagcggcccggcgccgtcaccattgccgaagagtcgacc
agcttccccggcgtgacgcgcccgcccgaagacggcggcctcggcttccactacaaatgg
aacatgggctggatgaacgacacgctggcctacgccggcaccgacccggtccatcgcaag
caccaccaccagaagatcaccttcggcctgatgtacgcgcacgacgagaacttcgtgctg
cccttctcgcacgacgaagtggtgcacggcaagggctcgatgatcggccgcatgccgggc
gacgactggcagaaattcgccggcctgcgcaacctgtacggctacctctgggcgtacccc
ggcaagaaactgctcttcatgggcaacgagttcgcgcaggtcaccgaatggaacgccgac
cgcagcctcgactggcacctgctcgaccacgagggcctgcaccgcggcgtgagccggctg
gtgcgcgacctgaacaacgtctaccgtcatttccccgcgctctatcaacaggacagcgaa
ggcgacggcttcgaatggatcgtgcacgacgacgtcgaccagtccgtcttcgccttcgtc
cggcgggcaaaggatgggtcgttcgtgatcgccgtctgcaatttcacgccggtggtgcgg
ccggcgtaccggctcggcgtcccggcggccgggtcgtaccgcgagatcatcaacaccgac
agcgcgacctatggcggcagcggcgtgggcaacggcgtcgtcgcgagcaccgcgcacggg
tgccacggaaaggcggattcgatctgcatcgacgtgccgccgttggggacggtgatgtgg
gtgctggcatga
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