Vibrio alfacsensis: D1115_14985
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Entry
D1115_14985 CDS
T05841
Symbol
vmeD
Name
(GenBank) multidrug efflux RND transporter permease subunit VmeD
KO
K18138
multidrug efflux pump
Organism
vaf
Vibrio alfacsensis
Pathway
vaf01501
beta-Lactam resistance
vaf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D1115_14985 (vmeD)
01503 Cationic antimicrobial peptide (CAMP) resistance
D1115_14985 (vmeD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaf02000
]
D1115_14985 (vmeD)
01504 Antimicrobial resistance genes [BR:
vaf01504
]
D1115_14985 (vmeD)
Transporters [BR:
vaf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D1115_14985 (vmeD)
Antimicrobial resistance genes [BR:
vaf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D1115_14985 (vmeD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
AXY02248
UniProt:
A0A347UTR9
LinkDB
All DBs
Position
I:3076936..3080058
Genome browser
AA seq
1040 aa
AA seq
DB search
MRFTDVFIKRPVLAVSISFLIALLGLQAVFKMQVREYPEMTNTVVTVTTSYYGASANLIQ
GFITQPLEQAVAQADNIDYMTSSSVLGTSTITVNMKLNTDPNAALSDILAKTNSVRSQLP
KEAEDPTVTMSTGSTTAVLYIGFTSDELSSSQITDYLERVINPQLFTVNGVSKVDLYGGM
KYALRVWLDPAKMGALKLTATDVMGVLNANNYQSATGQAVGEFVLYNGSADTQVSNVAEL
EALVVKTGDGDVIRLGDIAKVTLEKSHDVYRASANGKEAVVAAINAAPSANPINIAADVL
KLLPQLERNLPSNIKMNVMYDSTIAINESIHEVVKTILEAAVIVLVVITLFLGSFRAVII
PIVTIPLSLIGVAMVMQAMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKDGESPF
RAAIIGTREIAVPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGAVFVSGIIALTL
SPMMCSKMLKANEEPSKFEQKVHHILDGMTNRYEKMLKAVMAHRPVIIAFAVIVFASLPI
LFKFIPSELAPSEDKGVVVLMGTAPSNANLDYIQNTMNDVNKILSDQPEVEYAQVFNGVP
NSNQAFGLATLKPWSEREASQAEITKRVGDLVSHVPGMSVTAFQMPELPGAGSGLPIQFV
ITTPNSFESLFTIASDILTNVSKSPMFVYSDLDLNYDSATMKISIDKDKAGAYGVTMQDI
GVTLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMKNYYVRSVDGNAVPLGSLIT
IDVVAEPRALPHFNQLNSATVGAVPAPGVAMGDAINWFEDIAQNKLPAGYNHDYMGEARQ
FVTEGSALYATFGLALAIIFLVLAIQFESIRDPIVIMVSVPLAVCGALIALAWGTASMNI
YSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIDAVMEAAKVRLRPILMTTAAMIAG
LIPLMYATGAGAAQRFSIGIVIVAGLAIGTLFTLFVLPVIYSYLAEKHKPLPVFVEDKDL
EKLARVDEAKAAHRELAENK
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttactgatgtttttataaaacgtccagttttagcggtatcgatcagctttttg
attgcgttgcttggtttgcaagccgtcttcaaaatgcaggttcgtgaataccctgaaatg
acaaataccgtagtgacggtaactaccagttattacggtgccagtgccaacttgatccaa
ggcttcattactcagcctttggagcaagctgtcgcgcaggccgataatatcgattatatg
acttcgtcctcggtacttggtacatcaaccatcactgtgaacatgaagttaaataccgat
ccgaacgccgcactgtctgacattctggcgaaaaccaactcggttcgttcacagcttcca
aaagaagcagaagaccctacagtaaccatgtcgactggctcgactaccgcggtgctgtac
attggcttcacaagtgatgagttgtcttctagccaaatcaccgattatcttgaacgtgta
atcaacccacagctattcacggtaaacggtgtatccaaggtagacctatacggcggtatg
aagtacgcgcttcgcgtatggctcgatccagccaaaatgggggcacttaagctgacagca
acggatgtaatgggtgttctaaatgccaataactaccagtcagcaacggggcaggccgtc
ggcgagtttgttctttacaacggtagcgcagatactcaggtatcgaatgtggctgaatta
gaagccctcgttgtaaaaaccggtgatggtgatgtgattcgtcttggagacattgcgaaa
gtcaccctagaaaagagccacgatgtttaccgagcaagtgcaaatggtaaagaagcagtc
gttgctgcaataaacgccgcaccaagtgcaaacccaattaacattgcagcagatgttctg
aagctattgcctcaattagagcgtaacttaccaagtaacatcaaaatgaatgtgatgtac
gactcaaccatcgcgatcaatgaatccattcacgaagttgtgaagaccattcttgaagcg
gcagtcattgtactggtggttattactctattcctaggttctttccgagcagtaatcatc
cctatcgttactatcccgctatctttgattggcgttgcaatggtgatgcaggcgatgggc
ttctcgtggaacttaatgacactactggcaatggtactcgccatcggtctggtggtggat
gacgcgatcgttgttcttgagaacgtcgaccgccacattaaagacggggaatcaccgttc
cgtgctgcgatcattggtacgcgtgaaatcgcggtgccagtaatcgcaatgacactgaca
ctaggtgcggtatacgcaccgatcgcactgatgggtggtatcacgggctcgctattcaaa
gagttcgcattaaccctagctggtgcggtatttgtgtccggcatcatcgctctgacgctg
tcgccaatgatgtgttcgaaaatgctcaaggcaaatgaagagccaagcaagttcgagcag
aaagtgcatcacatacttgacggtatgactaaccgctatgaaaaaatgctcaaagcggtc
atggcgcaccgaccagtaatcatcgcttttgcagttatcgtattcgcaagcttgccaatt
ctgtttaagttcattccaagtgaactggcaccatcagaagataaaggcgtagtggtctta
atgggtactgctccatcgaatgcgaacttggattacattcaaaataccatgaatgacgta
aacaagattctgtctgatcagccagaagtggaatacgctcaggtatttaatggtgtgcca
aattcaaatcaagcatttggtctagcgactctaaagccttggagtgagcgtgaagcaagt
caagcagagatcactaagcgtgttggtgatttggtctctcatgtccctggtatgtcagta
acggcgttccaaatgcctgaactccctggtgcaggttctggtctgcctatccaatttgtc
attacaacaccgaacagctttgaaagcttatttaccatcgctagtgatattctaacgaat
gtgtcgaaaagcccaatgttcgtctactcggatctggatctaaactacgactcagcaacg
atgaagatcagcatcgacaaagacaaagcaggtgcgtatggcgtgaccatgcaagatata
ggtgtaacgctcagtactatgatggcggatggttatgtaaaccgtatcgacttaaatggt
cgttcatatgaggtaatcccgcaagttgaacgtaagtggcgcttaaacccagagtcaatg
aagaactactacgtacgttccgttgatggtaacgcagtaccgcttggtagcttaataacg
attgatgttgtcgcagaaccgcgcgcgctaccacacttcaaccaactaaactctgcaacg
gttggggctgtacctgcaccaggtgttgccatgggtgatgctatcaattggtttgaagat
attgcgcaaaacaaactgcctgctggctacaatcatgactatatgggtgaggctcgtcag
ttcgtaactgaaggtagtgcgctgtatgcaacgttcggcttagcattggcgattatcttc
ctagttctagcgattcaatttgaatctatccgcgatccaatcgtaattatggtatcagta
ccgctagcggtatgtggtgcactgattgctctggcgtggggtacggcatcgatgaatata
tactcacaagtgggtctgatcaccctggtaggtctgattaccaaacacggtatattgatc
tgtgaggtagcgaaagaagagcagctacacaacaagctgtctcgaatcgatgcggtaatg
gaagcggcgaaagttcgccttcgtccaatcctaatgacgacggcggcgatgattgctggt
cttatcccactgatgtacgcaacgggtgcaggcgccgctcagcgctttagtatcggtatc
gtaatcgttgctggtctagcgatcggtacgctatttacgctattcgtactgcctgtgatt
tacagctacctagctgagaagcacaaaccactaccagtgtttgttgaagacaaagacttg
gagaagctggctcgagtggatgaagcaaaagcagctcatcgcgaattagctgaaaataaa
taa
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