Verticillium alfalfae: VDBG_00160
Help
Entry
VDBG_00160 CDS
T02227
Name
(RefSeq) ATP-binding cassette sub-family B member 5
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
val
Verticillium alfalfae
Pathway
val02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
val00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VDBG_00160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
val02000
]
VDBG_00160
04147 Exosome [BR:
val04147
]
VDBG_00160
04090 CD molecules [BR:
val04090
]
VDBG_00160
Enzymes [BR:
val01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
VDBG_00160
Transporters [BR:
val02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
VDBG_00160
Exosome [BR:
val04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VDBG_00160
CD molecules [BR:
val04090
]
Proteins
VDBG_00160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_29
AAA_30
AAA_23
AAA_16
RsgA_GTPase
AAA_18
AAA_25
AAA_28
nSTAND3
AAA_15
SbcC_Walker_B
Herpes_Helicase
Motif
Other DBs
NCBI-GeneID:
9528586
NCBI-ProteinID:
XP_003008479
UniProt:
C9S8X6
LinkDB
All DBs
AA seq
1226 aa
AA seq
DB search
MADNDAGVAPADETEDTQPKPKIDPKHWITIFNFIRVLSYATAWDRLLLIVSVAAAVGAG
LTMPLMNILFGQLVGVFTGFFKQGSDETTQEFLDAVNVGVLYMVYLFFARLGLTYIANLG
FRMTSLRISAAIRLTYLQTLFTLPISMLDMLPPGQTAAIITTTASILQNGISEKMGQFFS
SIATVVAGFCIALSYNWMLTLATSTGLVFIAIVYLLSAPPVVRIMGEVQAVEVQAASVST
EAFASWRMLSACGAEGKMMARYASFVDETRHKGFGLAWIVAAQQSLSDTFALAFWYAFML
YSMMAITSPEPLIVVLLCVMVMASSIGQITAPLSAASQAASAGAIFHTIIDAPKTTYGTL
KAPEISADGDIVLENVNFVYPTRPDVKILEGLNLCFPAGKVTAIVGPSGSGKSTIVGILE
RWYEFNGDPVTNQLVLWLRNGLVTVGGHKLSDIDPKWWRNQIGLVQQDNALFNTTIYKNV
EHGLIGTEWECEAHHVKAKLVEEACRDAFADEFIVRLPDGYQTAVGESGIKLSGGQRQRL
AIARAIIKKPKILILDEATSAIDVRSEQIVQAALDRACRGRTTIVIAHRLGTIKKAHNIV
LLRHGKVVQQGTHESLMKEVGGAYHTLATAQQLDMGDGARNDLDSSSYDLGMGEKSAYTD
DTDMQEDFDEKAVGQDRRSRRRSRDSWRSLELHDDDSDDDLLDAEESLLRGITRAYRKEY
FANMLSKSASFFDAEANSAGALTARLATDPTQLQQLLGTNMAFALVSVFNVVGCVVVGLV
FGWKLTIVALCTSTPLIVAAMYYRVRHEMGFEAMNNAVFAESAKFASESIAATRTVSSLT
MEAGICGRYENLLRDHIGAAFRKSVFSVMLFSFSDSISLLCMAFVLWYGGHLLARHEYSP
FQYMIVYIAVVQGGMSAGQWLSYGPNIANATAAADRILAMREHDEDDVDADSVGSRQLHD
VPDEKEFHVEFKNVWINYPTRPGPVLKGLSLQRGQFAAIVGPSGSGKTTIISLLERFYSV
ETGTIAINAQNILDLDLHTHRSNLSLVSQEPNIFSGSLRANILLGVPNEPSVTDADLHRA
ARDAGLHDFIASLPEGYETPVGAAGVALSGGQKQRVSIARALIRRPELLLLDEATSSLDS
ETEREVQAVFDAAKGQRTMITVAHRLATVQNADIIFVMADGQITEKGDHAALIAKRGMYF
QMVSPTWQVAPDHLLTSQCQSQALDR
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaatgatgccggcgtcgcaccggcggacgagacggaggatacgcagccgaag
ccgaagattgaccccaagcattggatcaccatatttaattttattagagtcttgtcatat
gccacggcatgggacagactgctgctcatcgtgtcggtggctgctgccgtcggcgctggc
ttgacgatgcctttgatgaatattctgtttggccagcttgtcggtgtcttcactggcttc
ttcaaacaaggctccgacgagacgacacaggagtttctcgatgctgtcaatgtcggcgtc
ttgtacatggtgtacttgttcttcgcaagactaggtctgacctacatcgccaatctcggt
ttccgcatgacgagcctccgcatctcagctgccatacgcttgacttacttgcagacccta
tttacgcttccaatatccatgcttgacatgctccctcctggtcagacagctgccatcatc
accacgactgccagcattctccagaacggcatatccgaaaagatgggccagttcttctcc
agcatcgccaccgtggtcgcaggcttctgcattgccctctcctataattggatgcttacc
ctcgccacgagtacgggtctcgttttcattgccatcgtttatctgctctccgcgccgccg
gtagtacgcatcatgggcgaagtgcaggcagttgaggtgcaagccgcgtccgtttcaacc
gaagcattcgcgtcgtggaggatgctatcagcttgtggagcggaaggcaagatgatggca
aggtatgcgagctttgtagatgagacaaggcataagggttttgggctggcgtggatcgta
gcggcgcaacagtctctgagtgatacttttgccctggccttttggtatgccttcatgctg
tactccatgatggctattactagccccgagcctttgattgtcgtacttctatgcgtcatg
gttatggcctcatctatcggtcagatcacggcgcctctctctgccgcctcccaagctgcg
tcagccggcgccatctttcacacaatcattgacgccccaaagacgacgtacgggacactc
aaggcgcctgaaatctcagccgacggagacattgtcctcgaaaacgtcaattttgtctat
ccgactcgtccggacgtcaagattctggaaggcctgaacctttgcttcccagccggcaaa
gtcacggcaatagtcggtccctcgggctccggaaaaagcaccatcgtcggcatcctggaa
agatggtatgaattcaacggcgatcccgtcacgaaccaactagttctctggctccgcaac
ggtctcgtcaccgtaggcggccacaagctcagcgacatcgaccctaaatggtggcgcaac
cagattggtctggtccagcaggacaatgctctgtttaatacaaccatttacaagaatgtc
gagcatggcctcatcggcacagagtgggagtgcgaagcccaccacgtcaaggccaagctt
gtcgaggaagcgtgcagagatgctttcgccgacgagttcattgtccgcctgccagatggt
taccaaacagccgttggcgagtctggcatcaagctcagcggtggccagcgccagcgcctt
gctatcgcgcgcgccattatcaagaagcccaagattctcatcctcgacgaggcaacatct
gccatcgatgtgcgcagcgagcaaattgtccaagcggccctcgaccgggcctgcagagga
cgcacgacgattgtcatcgcacatcgtcttggcaccatcaagaaggcgcataatatcgtg
ctcctgcgccatggcaaggttgtccagcaaggaacgcacgagagcctaatgaaagaggtc
ggtggtgcatatcacactcttgcaacagcacagcagctggacatgggggatggtgcacga
aacgaccttgatagctcatcatacgatttagggatgggggaaaagtcggcttatactgac
gacacagatatgcaagaagatttcgacgagaaggcagtcggtcaagataggcgatcaagg
cggaggagccgggatagttggcgcagtcttgaacttcacgatgacgattctgacgacgac
ctgcttgatgctgaggagtcacttctgaggggcataacccgtgcgtaccgcaaggaatac
tttgccaacatgctatccaaatccgcctccttcttcgatgcagaagcaaattcggctggc
gccctcaccgctaggctcgccacggacccaacacagctccagcagctcctgggcaccaac
atggcatttgctcttgtatccgtcttcaacgttgtgggctgtgtcgtcgtcggccttgtc
tttggttggaagcttaccattgtggcgctgtgcacctcaacacccctcatcgtcgcggct
atgtactaccgcgtgcgacacgagatggggttcgaggcgatgaacaacgccgtcttcgcc
gagagcgccaaattcgcgtcggagagcatcgctgccacgaggacggtgtccagtctgacg
atggaggctggcatctgtggacggtacgagaacctgttgcgcgaccatattggtgccgcg
tttcgcaagtcagtcttctcggtgatgctgttctccttcagtgacagcatctctctcctg
tgcatggcatttgtgctctggtacggaggtcatctgcttgcccgacatgaatattcgcct
ttccagtacatgatcgtttatatcgcagtagttcaaggtggcatgagtgccggacagtgg
ctgagctatggtccaaatattgcgaacgcaaccgctgcagctgaccggatcctggcgatg
cgagaacacgatgaagacgatgtggatgcagatagcgtgggctcaagacagttgcacgat
gtcccagatgaaaaggagtttcatgttgagttcaagaacgtctggatcaactacccgaca
cggccggggccagtgttgaagggattgagcctccagaggggacaatttgccgccatcgtt
ggtccatcaggctctggcaagaccacaatcatctcccttctcgagcgattctattctgtt
gagacaggcacgattgctatcaacgcccaaaacatcctcgatctcgacctccacacccat
cgatcaaacctctctctcgtctcccaggaacccaacatcttcagcggtagtcttcgcgcc
aacatcctccttggcgtgcccaacgagccctccgttacggatgcagacctccaccgcgct
gcccgcgacgcaggacttcatgatttcatcgcctccctgcccgagggctacgagacgcct
gtcggcgccgcgggcgtcgctctctcaggaggccaaaaacagcgcgtatccatcgcccga
gcgctcatcaggcggccggagcttcttctcctcgatgaagcgacgagcagcctcgatagt
gagaccgagagggaggtacaggccgtctttgatgcggcaaagggccagaggaccatgatc
acggttgcgcacaggcttgctaccgtgcagaatgcggatatcatcttcgtcatggccgac
ggacaaatcaccgagaagggagaccatgcagcactcattgcgaagagagggatgtatttc
cagatggtaagtcctacttggcaagttgctcccgatcatttacttacgtcgcagtgtcaa
tcgcaagcgttagacaggtaa
DBGET
integrated database retrieval system
