Verticillium alfalfae: VDBG_07013
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Entry
VDBG_07013 CDS
T02227
Name
(RefSeq) guanylate kinase
KO
K12878
THO complex subunit 1
Organism
val
Verticillium alfalfae
Pathway
val03013
Nucleocytoplasmic transport
val03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VDBG_07013
09122 Translation
03013 Nucleocytoplasmic transport
VDBG_07013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
val03019
]
VDBG_07013
03041 Spliceosome [BR:
val03041
]
VDBG_07013
Messenger RNA biogenesis [BR:
val03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
VDBG_07013
Spliceosome [BR:
val03041
]
Complex C
Other components
EJC/TREX
VDBG_07013
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
VDBG_07013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Guanylate_kin
MMR_HSR1
nSTAND3
AAA_18
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
9527436
NCBI-ProteinID:
XP_003002442
UniProt:
C9SPX8
LinkDB
All DBs
AA seq
854 aa
AA seq
DB search
MPGTIVSDGRVSTVADVSAVLSDLLDRARGTKPPTIEPALQKSDLGNDIDRITAIFADGR
GAEATESAAQQSQDKIRQFAVIETAVRDLFKTLVFNTKIESPEFVQLWNLFDIVSILSDN
GSCDPALLFWMVEELLDSQTIAGCRKIFDFLESRRERITSSHFKQKQLVILRTCNELLRR
LSRAEDTAFCGRVFIFMFQSFPLGDRSSVNLRGEYHVENVTAYDQSAAPMDPDADKMEVE
KDAAAGPDANKQSSQDGAVNADALYPVFWSLQESFSQPKKLFDMTNLEGFKQGLEATVKA
FKVVQKEQGSRPPKAADSAVGGTKRKRNHDDQGDQSNAFNPKYLTSQDLFELEISDLSFR
RNILVQAYIILEFLLSLSAKAKEKLATIKTQNKSVMYMDQTLSEEDAKWASDMKEAVEDG
LKQGSDGPHYHRMVETVLVRDRNWIRWKMEGCPPIELPPLSPETWSKAQDELYSITRNKR
MKPPMGSLPLDFMQDEDDEKALDKLRAPDRYELPELGSFRRKIADDDFEIEMPTNDETKA
AAIESKASKSWRALRIAARSRLGLFDKISDPEKIDAIFGEIEDPDAVPEPEAAPEQKAVL
PTDQRPVVISGPPGVGKSTTTDVLLSRQPGAFAKVVRHTTRKPQDGEVAGRDFLFVDKQT
FDMQRDGDALIEYTTIDGDDYGTSRKTIDGIVASGKVPILHMDQEARSFGFEARFVLLLP
PNQETMEARLTAAGEREDAVKATGAAVAPYLAEGSILKEGFDEVLVNEKLDATFKALETF
IYGAEQGVSEPEKTDEKPTEETEAQTEHKLSEDAPAAAADKNEDDAVMADAAPAAEDPDK
AQEGLGEFKPSAAT
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgccaggaacaatcgtcagcgatgggcgtgtttccacagtagccgatgtttcggctgtc
ctgagcgatcttctcgaccgtgcaagaggaacgaaacctcccacgatcgagccagcgctc
caaaagtccgacctcggaaacgacattgataggataaccgccatctttgccgatggccgt
ggtgctgaggctactgagagcgcggcgcaacagagtcaagacaaaatcagacagtttgcc
gtcatcgaaaccgctgttcgcgatctcttcaaaaccctggtcttcaacacaaagatcgaa
tccccggagtttgtgcaactttggaacctcttcgacatcgtttctatactatccgataac
ggatcgtgcgaccccgcgctgctcttctggatggtcgaagagcttctcgacagtcaaacg
atcgccggctgccgcaagatcttcgatttcctcgagtccagacgcgaaaggattacctcg
agccattttaagcagaagcaactggtaatcctgcgaacttgcaatgagctactgcgccgt
ctttctcgcgccgaagacacggctttctgtggtcgagtctttatcttcatgttccagagc
ttccccttgggagaccgaagctccgtcaatttgcgcggcgaataccacgtggaaaatgta
acagcatacgatcaatcagcggcaccaatggaccccgacgcggacaagatggaagtggag
aaagatgcggctgctggacccgacgcgaacaagcaaagctctcaagacggcgctgtgaac
gctgatgctctgtatccagtcttttggtcgcttcaggaaagtttcagtcagcccaagaag
ctgtttgacatgacgaacctagagggattcaagcaaggcctagaagcgacggtcaaggcg
ttcaaagtggtccagaaagagcagggcagcagaccacccaaagctgccgacagcgctgta
ggcggtactaagcggaagcgcaatcatgacgaccaaggagatcagtcgaatgcattcaac
ccgaaatacctcaccagccaagaccttttcgagctcgaaatcagcgacctatcgtttcga
agaaatattctggtccaggcctatatcatactcgagtttctactctcactctcagccaag
gcgaaagagaagctcgcaacgatcaaaacgcaaaacaagtctgtcatgtacatggatcag
actttgagcgaagaagatgcgaaatgggcgagtgacatgaaagaggccgtggaggacggc
ctgaaacagggcagcgacggacctcattaccatcgtatggtggagacagtgctggttagg
gaccgcaactggatacgatggaagatggaaggctgccctccgatcgagctgccccccctc
tcgccggagacatggtcgaaggcccaggatgagctctactccatcacaaggaacaagcgc
atgaagccgcccatgggctcgctgcctctggactttatgcaggacgaggacgacgagaag
gctcttgacaagctcagggcacccgatcgatacgaacttcctgagcttgggagtttcagg
aggaagattgcggatgacgactttgagattgagatgccgacgaacgacgagacgaaagca
gcagcgatcgagtccaaagcgagcaagagctggcgtgccttgcgcatagcggcaaggtcg
agactgggtctatttgacaaaatcagcgacccagaaaaaatagacgccatttttggcgaa
atcgaagaccctgatgcggtccctgaacccgaagcagcgccggaacaaaaggccgttctc
cccaccgaccagcgacccgttgtcatctcaggccctcccggcgtgggcaagtcgacgact
actgacgttctactcagccgtcaaccgggcgcattcgcaaaggtcgttcgccacacaacg
cgcaaaccccaagacggcgaggtcgcggggcgggatttccttttcgtagacaagcagacc
tttgacatgcagcgcgacggcgacgcgttgatagagtacaccacgatcgacggagacgac
tacggcaccagtcgcaagacaattgatgggatcgtcgcaagcggcaaggtgccgatcctg
cacatggaccaggaggccaggagtttcggtttcgaggctcgctttgtccttctccttcca
ccaaaccaggagactatggaggcacggctcacagccgccggggaacgcgaagacgccgtc
aaggccacaggagccgctgtcgctccttatctcgccgagggatccatactcaaggaaggg
ttcgacgaggtgctcgtgaatgagaaactcgacgccacattcaaggccttggagacgttt
atttacggagccgagcagggagtgtcggagccggagaaaacggacgagaagccgactgag
gagacggaggcgcagacagaacacaagctgagcgaggatgcgcctgcagccgcggcagac
aagaacgaagatgatgctgtcatggctgacgcggcgccggcagccgaagacccagacaag
gcacaagaaggtttgggggagttcaagccttcggctgcgacgtaa
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