Verticillium alfalfae: VDBG_07447
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Entry
VDBG_07447 CDS
T02227
Name
(RefSeq) chromatin structure-remodeling complex protein RSC2
KO
K11756
chromatin structure-remodeling complex subunit RSC1/2
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_07447
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_07447
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
VDBG_07447
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
VDBG_07447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
CDC45
Motif
Other DBs
NCBI-GeneID:
9536971
NCBI-ProteinID:
XP_003001988
UniProt:
C9SRC2
LinkDB
All DBs
AA seq
1002 aa
AA seq
DB search
MAGTRSNATDVRDSIEAKLDKDKDKTNGHDMDLDTPENAADDVDMKDQHDEEDADGEADA
EADADGEDDTSQQDVDEPGDLLSVLGTLESELSRYEEDGEELAAPFQRIPNKRSLPDYFQ
IIEEPTAFSSIRKKVQKKEYTSASEFVRDLALICHNAQVYNLPSAPIFHAAVRLREVAKE
KLQKLVTAGVLTAAEVEFPFLGELPPAEEASENAGEEDEEDEEEEEEEEDDDDSDDDENG
RGRKTRKIGRRPDASREEEDHKKRGRPPKVLTPAEVRIDSVLKGLRKFKDESGELRILPF
EKLPDKQELPEYYDAIQKPIALDMIRQKFKRKKYATVDDLIQDLDLMFENAKLFNEDDSD
IHQTAIDLQREARSLAQQEKAKPDSLCRADDGRLPLAEVQHNGETWRVGDWVHINNTNDV
TKPIVAQIFRLWQDPKGQRWINACWYYRPEQTVHHEDKHFYEHEVAKSTQYRDHAIEEVI
DRCFVMFVTRFFKGRPRGLPAGKSVYVCESRYNEEKCRFARIKTWSSCVPDEVREKDYVS
DPFPHPLRMKKFPSPIKHLIRQNAKPTDPLPKPTWGYKNMPPVIGAVHRRPRESNESPPP
QPTPPAQPAQPILSNTGRRPSSFRGSQPPASPFHMAPPGASPSPAPLVPQYHGQQQPQPQ
PQQHQYTSASPVAHHQSPHQPAPHYPQGQQPQPQQPGQSPYLNYRQPQQPPGQNAGQMFS
QQQHNMPQAPMHRPQGSNMATDQYQNGFQGNFQGPQYNQRQGQHPPAYPHSPATHIQQGQ
LNVQPQSHAQIPQMQPSHMANSGFADHRMSMGTNRNTMAPTAGIQMQPYVPAQQQHLPPQ
QQQQNSHNAAPSTEVFTLPDELNNEIPEEIRLMYNNDNGKLLWYTTPPRKNRSVSAKSAM
KENALAMTPMQREIEDLASAKWRQVRDTKGGPRDSSSCFRSTFKRAKIGSNAAHEGYRIL
NEEFQMGPNYRKRYMEEKEAARQKRIAEDEAKRKAAAEDRTI
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcacgcgcagcaacgcaaccgacgtgcgcgattccatcgaggccaagcttgac
aaggacaaggacaagaccaacggccacgacatggacctcgacacccctgaaaatgcagca
gatgacgtcgatatgaaggatcagcacgacgaagaagatgccgacggggaagctgacgct
gaggccgacgccgacggcgaagatgatacttcccagcaagatgttgatgagcctggagac
ctgctgtctgtcctcggcacgcttgagtccgagctgagcagatatgaggaagacggagag
gaacttgccgcgcccttccagcgcatccctaacaagcgatcgctacccgactatttccag
atcattgaagagcccacggcattcagcagcatcaggaaaaaggtccagaagaaggagtac
accagcgccagcgaattcgtgcgagacctggctctcatctgccacaacgcgcaggtttat
aatcttccgagcgccccaatctttcatgctgctgtcagattgcgcgaggttgccaaggag
aagctgcaaaagctcgtgacagccggcgtcttgaccgctgccgaggttgagtttcctttc
ctgggcgagttgcctcctgcagaggaagcctccgagaacgccggtgaagaggacgaagag
gatgaagaggaagaagaagaggaagaggatgatgacgactccgacgatgacgaaaatggt
cgtggtcgcaagactcggaagattggacgtcgcccagacgcaagccgggaggaagaagac
cataagaaaagaggccgcccgcccaaggtgctcacacctgctgaggtccggatagattcc
gtcctcaagggattgcgcaaattcaaggacgagtccggcgagctgcgcatcctacccttt
gagaagctgcctgacaagcaggaactgcccgagtactatgacgccattcagaagcctatt
gctctcgacatgatccgccagaagttcaagcgcaagaaatatgctactgttgacgacctt
atccaggacctggacctcatgtttgagaacgccaagctcttcaacgaagacgacagtgat
attcaccagaccgccattgatctccagagggaagcgcgctcgctggcacagcaggagaaa
gccaaacctgatagtctttgccgagctgacgacggcaggttgccgttggccgaagtacag
cataacggtgagacctggagagttggcgactgggttcacatcaacaacacaaatgacgtg
accaagcccatcgttgctcagatcttccggctctggcaagaccccaagggccagcgctgg
atcaacgcctgctggtactatcgccccgagcagaccgtgcaccacgaggacaagcacttc
tatgagcacgaggtcgccaagtcgacgcagtaccgcgaccatgccatcgaggaggtcatt
gatcggtgctttgtcatgttcgtgacgcgtttcttcaagggacgcccccgcgggctgcct
gccggtaagagcgtgtatgtctgcgagtcgaggtacaacgaggagaagtgccgatttgcc
cggatcaagacatggtcgagctgtgtgccagacgaagtccgcgagaaagactacgtctct
gatccgttccctcatcccctacgaatgaagaagttccccagccctatcaagcacctcatc
aggcagaatgcgaagccgaccgatccgctgccgaagccgacttggggctacaagaacatg
ccgcctgttattggtgctgttcatcgtcgtcctagagagtccaacgaatcacctccaccg
cagcctacacctccggctcagcctgctcagccaattctttctaacacaggacggaggcct
tcctcgttccgcggttcccagccaccagcgtcgcccttccacatggcccctcctggcgcc
tcgccatctccggcgcctcttgttccccagtaccacggacagcagcagccgcagccgcag
cctcagcagcatcagtacacttctgcgtctccggttgctcatcatcagagtcctcatcag
cctgctccgcactacccccagggccagcagccgcagccgcagcagcctggtcagagcccc
tacctcaactaccggcagccacagcagccacctggtcagaacgctggccagatgttctcg
cagcagcagcataacatgccgcaagctccgatgcatcgcccacaaggatccaacatggca
accgaccagtaccagaatggctttcagggtaacttccagggcccgcagtacaatcaacgc
caaggccagcatccacctgcgtacccacactcgcccgcgacccacattcaacagggacaa
ctaaatgtgcagccccagtctcatgctcagattcctcagatgcagccatcgcacatggcc
aattcaggcttcgctgaccaccgcatgtccatgggcaccaaccgaaacaccatggccccc
actgctggtatccagatgcagccctacgtccctgcgcagcaacagcacctgccacctcag
cagcagcagcagaattcgcacaatgccgcgccctccacggaagttttcaccctcccggat
gagctcaacaacgagatccccgaggagatccgcctcatgtacaacaacgacaatggaaag
ttgctctggtacacgactccgcccaggaagaacagaagcgtcagcgcaaagagcgcaatg
aaagagaacgcgcttgccatgacccccatgcagcgggagattgaggatctcgccagtgcg
aagtggcgtcaagtgcgcgacacgaaaggaggcccgagagacagcagctcctgtttcaga
tcaactttcaaacgtgcgaagattggctccaatgcggcgcatgagggctacagaatcctt
aatgaggaatttcagatgggtccgaactaccgaaagcgttatatggaggagaaggaggct
gcgcgccagaaacgcatcgccgaagacgaggctaagcgcaaggccgccgctgaggatcgc
accatttga
DBGET
integrated database retrieval system
