Verticillium alfalfae: VDBG_09483
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Entry
VDBG_09483 CDS
T02227
Name
(RefSeq) pectate lyase B
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
val
Verticillium alfalfae
Pathway
val00040
Pentose and glucuronate interconversions
val01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
val00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VDBG_09483
Enzymes [BR:
val01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
VDBG_09483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9527989
NCBI-ProteinID:
XP_003000288
UniProt:
C9SXI3
LinkDB
All DBs
AA seq
333 aa
AA seq
DB search
MKFSNVLNLALLGFATATPTPTIQEDGSPALIAKRASVTESCNIGYASTNGGTTGGKGGA
TTTVSTLAQFTKAAESSGKLNIVVKGKISGGAKVRVQSDKTIIGQKGSELVGAGLYINKV
KNVIVRNMKISKVKDSNGDAIGIQASKNVWVDHCDLSSDLKSGKDYYDGLLDITHGSDWV
TVSNTFLHDHFKASLVGHTDSNAKEDKGKLHVTYANNYWYNVNSRNPSVRFGTVHIYNNY
YLEVGSSAVNTRMGAQVRVESTVFDKSTKNGIISVDSKEKGYATVGDISWGSSTNTAPKG
TLGSSNIPYSYNLYGKNNVKARVYGTAGQTLGF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctccaacgttctcaacctcgcccttctgggattcgccacggccacgcccacc
cccaccatccaggaggacggcagtcctgcgctcattgccaagcgcgcctccgttaccgag
agctgcaacatcggttacgccagcaccaacggcggcaccaccggcggcaagggtggtgcc
acgacaaccgtgtcgacccttgcgcagttcaccaaggctgccgaatcgagcggcaagctc
aacattgttgtcaagggcaagatttccggcggcgccaaggtgcgtgtgcagtcggacaag
accatcatcggccagaagggctctgaactcgtcggtgccggcctctacatcaacaaggtc
aagaacgtcatcgttcgcaacatgaagatcagcaaggtcaaggactccaacggcgacgcc
attggtatccaggcctctaagaacgtctgggttgaccactgcgacctatcctccgacctc
aagtcgggcaaggactactatgacggtctcctcgatatcacccacggctccgactgggtg
actgtctccaacaccttcctccacgaccacttcaaggcttcgcttgtcggccacaccgac
tcgaacgccaaggaggacaagggcaagcttcacgtcacctacgccaacaactactggtac
aacgtcaactcgcgcaacccctccgtccgtttcggtactgtccatatctacaacaactac
tacctcgaggtcggcagctccgccgtcaacacccgcatgggcgcccaggtccgtgtcgag
tctaccgtctttgacaagtcgaccaagaacggcatcatctcggtcgactccaaggagaag
ggctacgccaccgtcggcgacatctcttggggttcctccaccaacactgcgcccaagggc
acccttggcagcagcaacatcccctacagctacaacctctacggcaagaacaatgtcaag
gctcgtgtctacggcaccgccggtcagacccttggcttctaa
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