Verticillium alfalfae: VDBG_09583
Help
Entry
VDBG_09583 CDS
T02227
Name
(RefSeq) multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
val
Verticillium alfalfae
Pathway
val02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
val00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VDBG_09583
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
val02000
]
VDBG_09583
04147 Exosome [BR:
val04147
]
VDBG_09583
04090 CD molecules [BR:
val04090
]
VDBG_09583
Enzymes [BR:
val01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
VDBG_09583
Transporters [BR:
val02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
VDBG_09583
Exosome [BR:
val04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VDBG_09583
CD molecules [BR:
val04090
]
Proteins
VDBG_09583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
RsgA_GTPase
AAA_21
AAA_25
AAA_28
nSTAND1
AAA_23
AAA_15
AAA_7
Motif
Other DBs
NCBI-GeneID:
9528093
NCBI-ProteinID:
XP_003000388
UniProt:
C9SWT2
LinkDB
All DBs
AA seq
1286 aa
AA seq
DB search
MAVANEKATQGDSPMSPGLAPTPAYIPVAEKRDGKVDEEKNMGPVEGYIRIFKYGTKSEH
SMQAVAILCAVGSGVAMAMVNLVFGQFITVITKFVTGQNTPAEFRKDASRLALYFFIIGI
VRFKLSYGYATFLTLAAYRTTRNIRTAYLRAGLSQDVAYFDAAEGGSIAVQATSNGKLIQ
AGISEKLGMVFQGLAAFVAAFALAFATQWKLTLITCCIAPATLLVIGVASTIEAGIETEI
LKVHAQGGSFVESVLSSARTIQAFALRTRLVENFDSYLKEARRLGNKKNLLFGIMFSAEY
FIMFAGMGLCFWQAISMLVKGEVDEPGDVFIVLMSVIVAASSLTSIAPYLIDFSRAAAAA
AELFRLIDRPSKIDPNDPSGAKPDVVEGTLECENIVFSYPMRPGVTVLNNFTLRIPAGKV
TALVGASGSGKSTIIGLIERWYNPNSGCLKLDGRPIDSLNVSWLRKQVRLVQQEPVLFSG
TVFDNIANGLAGTGWEDESKEQKLARVQEAAKVAFAHDFISELPEGYDTVIGERGGLLSG
GQKQRVAIARSIVSQPKILLLDEATSALDPHAEEVVQKALDNVSKGRTTITIAHKLATIR
NADNIVVMEHGRIIEQGTHQSLLEAEGGYSRLVKAQDLSVAAKLDSEDDDDDATADGAAD
RKSVELTRSLTRYSTTAQQGIASRLSRDDFENWKSTGLVTTILKIIRSTPELIWTYLALF
TGCCLAAGAYPGQAVLMSKFIDVFKLTGNEMRKEGNFLALMLFVMACGCLVVYFIIGYSS
NVVAQTLNHKYRKQIVNDMLRQDLQFFDRPENTTGALSSRTDSYPQAVFELMGFTVALIL
ISIVGVVSCSVLALAYGWRLGVVVVFAGLPPMLISGYARIRMESAMDAKINKRFSQSASI
ASEAINSIRTVSSLAIERKVLERYDAELAHAIADSRKPITLIMLPFAFTQSVEYWFQALG
FWYGCRLVSFGQLTMVEFFTTFLAVYFSGQQASILFGFSGSMTKATGAANYLFWLQQLEP
TIRETPENRDMAPQGFKSLDIEDVKFSYPMRPDARILRGIDLTIKQGQFVAFVGASGCGK
STMIAMLERYYDPVTGRLLVDGQPLSSLNPWAYRNDVALVQQEPKLYPGTIRENISMGVP
SGGTSKVPEADIIAACHSANAWDFISSLPDGLDTNCGSNGLQLSGGQRQRIAIARALIRK
PRLLLLDEATSALDTQSERIVQDALNEAAKTGDRITVAVAHRLSTVRHADMICIFHGGRI
VDTGTHEELLATSEMYRKMCEAQNLG
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgcaaacgaaaaggcaacacaaggggacagcccaatgagtccaggtctggcc
cccacgcccgcctatatccccgtcgcagagaagcgtgatggtaaggtggacgaagagaag
aacatgggccctgtggaaggttatattagaatcttcaaatatggcaccaaatccgaacac
tcgatgcaggctgtggccatcttgtgtgccgtcggctcaggcgtggccatggcaatggtc
aacctggttttcggccagttcatcaccgtcatcaccaagttcgtgaccggccagaatacg
ccagcggagttccgtaaagatgcatctcggcttgccctctacttctttatcatcggcatc
gtgcgcttcaaactcagttacggctacgccaccttcttaacactcgccgcttatcgcaca
actcgcaatatccgcactgcgtatctccgagccggtttaagtcaggacgtagcctacttt
gatgcggccgagggcggatccattgccgtccaggccacctccaacggcaagcttatccag
gctggcatctccgagaagctcggcatggtcttccagggacttgcagcgtttgtcgccgcc
ttcgctctggcctttgccacacagtggaagctcacccttattacttgctgtattgcccct
gctacgctgctcgtcatcggagtagcctccactatcgaggccggtatcgagaccgaaatc
ctcaaagttcatgcgcagggaggcagtttcgtcgagagcgtgctctccagcgcccgcact
atccaggctttcgccctccgcaccagactagttgagaactttgactcttacttgaaagaa
gctcgccgactcggtaacaagaagaacctactttttgggatcatgttctcggctgaatac
tttatcatgtttgctggaatgggtctgtgtttctggcaagccatcagcatgctcgtcaag
ggggaggtagacgagccaggagacgtttttatcgtcctcatgtccgtcattgtggccgcc
tctagtctgacttcaatcgctccctacctgatcgacttcagccgtgctgcagctgcagct
gctgagctgttccgcctcatcgaccgcccctcgaagattgacccgaacgatccttcgggt
gcgaagcctgacgtcgttgagggtactcttgaatgcgagaacatcgtctttagctaccct
atgcgccctggcgttactgttctgaataacttcaccctgcgcattcctgccggtaaggta
acggctcttgttggagctagtggctctggtaagagtaccatcatcggcctcatcgagcga
tggtataaccccaactcgggttgcttgaagctcgacggtcgtcctatcgacagcctaaat
gttagttggctgaggaaacaagtccgtctcgtccagcaggaacctgtcctcttctccggt
actgtcttcgataacattgccaatggtctagctggtacgggctgggaggacgagtccaag
gagcagaagttagcccgtgtgcaagaggcagccaaggtcgcctttgcccacgattttatc
agtgagctccccgaaggttacgacacggtcatcggagaacgcggtgggcttctatctggc
ggccaaaagcaacgcgtggccatcgcccgcagcatcgtctcacagcctaagattctcctt
ctcgacgaggccaccagcgctctcgacccgcacgccgaagaagtcgtccagaaggccctt
gacaacgtgtccaaaggtcgcaccaccatcactattgcccataagcttgctactattcgg
aacgccgataatattgtcgttatggagcacggtcgcatcatcgaacaaggcacccaccag
tccctcctcgaagcagagggtgggtattcccgcctcgtcaaagcccaggacctttcagtc
gcagccaagctggattccgaagatgatgacgacgacgccacggccgacggtgcggctgac
cgcaaatctgtcgagctcacccgatcgcttacgcggtactcgacgacagcacaacaaggc
atagcgtctcgcctctcccgtgatgattttgagaactggaagagcactgggctcgtgact
accattctcaagattatcagatctactcctgagcttatctggacctatctggcccttttc
acgggctgctgcttggcagctggtgcttatccaggccaggccgtgctgatgtcaaaattc
atcgatgtcttcaagctcacaggtaatgaaatgcgaaaggagggcaatttcctcgcgctc
atgttgttcgtcatggcttgcggctgtcttgtcgtgtacttcattattgggtattcatcc
aacgtggtcgcccagactcttaaccataaatatcggaagcaaatcgtcaacgacatgctg
cgccaggatctccagtttttcgaccggccagaaaacactacaggtgccctgagcagccga
accgactcctacccccaggctgtattcgagctcatgggcttcaccgttgccttgattctc
atctccatcgtcggcgttgtatcatgctctgtcctcgcgctggcctacggatggaggctc
ggcgtcgtggtagtatttgccggtctgccccctatgctgatctcggggtatgctcgcatc
aggatggagtcagctatggacgccaaaatcaacaaacgcttttcgcagagtgcatcgata
gcctcggaagccatcaattcgatccgcacggtgtcgtcgttggctattgagcggaaagtc
ctcgagagatacgacgcagagctggcacacgccatcgcagactcgcgtaaacccatcaca
cttatcatgcttccttttgcctttacccagagtgtcgaatactggtttcaggcactgggt
ttctggtacggatgtcgtcttgtatcctttgggcagctaaccatggttgaattcttcact
acattccttgctgtgtacttttctggtcagcaggcctctatattgtttggcttctccggc
agcatgaccaaggcaacgggcgccgcaaactacctcttctggctccagcagcttgaacct
acaatccgcgagaccccagagaaccgagacatggctccccaaggtttcaagagcctcgat
attgaggacgtgaagttctcatatcccatgaggcccgacgcacgtatcctccgtggcatc
gatctcactatcaaacaaggacaattcgtcgcattcgtcggcgcttccggctgcggcaag
agcaccatgatcgccatgctagaacgctactacgacccggtaacgggtcgactccttgtc
gacggccagcccctgtcttcgctgaacccctgggcgtaccgaaacgacgtcgccctcgtg
cagcaggagcccaagctctaccccggcacgatccgtgagaacatctccatgggcgtgccg
agcggaggcacgtcgaaagtacccgaggcagacatcatcgccgcgtgtcactccgccaac
gcatgggactttatcagctcgctaccagacggtctagacacaaactgtggcagcaacggc
ctccagctttcaggcggccagcggcaacgcatcgccatcgcgagagcgttgatccgaaag
cctcgactgctcctcctcgacgaggccaccagcgcgctggacacgcagtcggagcgaatc
gtgcaggacgcgctgaacgaggctgccaagacgggcgatcggattaccgttgccgtcgcc
catcgactgtcgacggtgcgccatgctgatatgatatgcatcttccacggtggtagaatt
gttgataccgggacgcatgaggagcttcttgccacgagcgagatgtaccgaaagatgtgc
gaggcacagaatctgggataa
DBGET
integrated database retrieval system
