Variovorax sp. PMC12: C4F17_08385
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Entry
C4F17_08385 CDS
T05380
Name
(GenBank) DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4F17_08385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vam03400
]
C4F17_08385
Enzymes [BR:
vam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
C4F17_08385
DNA repair and recombination proteins [BR:
vam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C4F17_08385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
DUF4440
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AVQ80963
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All DBs
Position
1:1794460..1795044
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AA seq
194 aa
AA seq
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MSQQPPKIRCAWAQTDPLLAAYHDAEWGVPEHDSRALWEKLMLDGFQAGLSWLTILRKRD
AFRKAFEGFVPEKIVKFTEADIERLMQDAGIVRSRSKIEATIGNARAYLAMQAAGEDFSE
FIWGMAGGKPIVNRTGSVPVKTPLSEEISAALKKRGFKFVGPVIVYAWMQATGIVDDHAA
DCHRHGARHKARPQ
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacagcccccgaaaatccgatgcgcctgggcccagaccgacccgctcctggcc
gcctaccacgacgccgaatggggcgtgcccgagcacgacagccgcgcgctgtgggagaag
ctcatgctcgacggcttccaggccggcctgtcgtggctcaccatcctgcgcaagcgcgac
gccttccgcaaagccttcgagggcttcgtgcccgagaagatcgtcaagttcaccgaagcc
gacatcgaacggctcatgcaggacgccggcatcgtgcgctcgcgctcgaagatcgaggcc
accatcggcaatgcgcgtgcctacctcgccatgcaggcggcgggcgaagacttctctgaa
ttcatctggggcatggctggtggcaagcccatcgtgaaccgcaccggaagcgtgcctgtg
aagacgccgctgtcggaggaaatctccgccgcactgaaaaagcgcggcttcaagttcgtc
gggccggtgatcgtctacgcatggatgcaggccaccggcatcgtcgacgaccatgccgcg
gactgccacaggcacggcgccaggcacaaagccaggccccaatga
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