Variovorax sp. PMC12: C4F17_13480
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Entry
C4F17_13480 CDS
T05380
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_13480
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_13480
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AVQ84607
UniProt:
A0A2P1VHL7
LinkDB
All DBs
Position
1:complement(2869642..2871765)
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AA seq
707 aa
AA seq
DB search
MKLSPVAAAAVACLSLHVPSPADAQEAAPAALREITVSTPRGEVAPFNVPGSVDRVDGAE
MRDSRLQVNLSESLGAVPGLQVQNRQNYAQDLQLSIRGFGARSTFGVRGVRLYVDGIPAT
LPDGQGQTSNIDIGSVDRVEVLRGPFSALYGNSSGGVVQAFTASGEGAPRLAYSLAGGSF
GTWRQSLQLSGSQGAVDYMLDASRFRTDGWREHSAARRDIANGKLGIALDNGDKLTLVMN
SVRIDAQDPLGLTADQYALAPRNAPLATQYDTRKTVEQTQAGLLYERRIDAGQALRLMVY
GGQRETTQYQSIPPSAQQNPLHAGGVIDLSRQYGGIDLRWSAALQLADRPLDVVAGLGYD
NLREKRRGYENYLGPLANPVLGVQGRLRRNELNTVWNLDPYAQATWRLAERWTLEAGVRR
SSVHFDSHDRYIIGANRDDSGSARYGKTLPVASLRYQATPDLALYGSAGRGFETPTLNEL
SYRANGASGLNFALRPSMNDSLEVGAKARLAGGLLTAALFQTRTRDEIVTDTNVGGRATF
QNAGRTKRNGFELGWQHETASHWRTQLAYTWLDATYRDAFCSPSPCVTANTVASGNRIPG
IARQSLFASLGWVPPEGWRAGAEVRALGRILANDVNTAVASGYAVAAVYAGYLKKWERWE
LNAFARVDNLFDRRYVGSVIVNEGNGRFYEPALGRNWTVGLSGAYRF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctcgcccgttgccgccgccgccgttgcctgcctgtcgcttcatgtcccgtcg
cctgccgatgcgcaggaggcggcaccggccgcactgcgagagatcacggtttccacgccg
cgcggcgaggtcgcgcctttcaacgtgcccggctcggtcgaccgggtcgacggcgcagaa
atgcgcgacagccgcctgcaggtcaatctctccgaaagcctgggcgccgtgcccgggctg
caggtgcagaaccggcagaactacgcacaagacctgcaactctccattcgcggcttcggc
gcgcgctccaccttcggcgtgcgcggcgtgcggctgtacgtcgacggcattcccgccacc
ttgcccgacgggcagggccagacctcgaacatcgacatcggctcggtggaccgtgtcgag
gtcttgcgcggaccgttctccgcgctctacggcaattcttccggcggcgtggtgcaggcc
ttcaccgcatcgggcgagggagcgccgcggctggcgtattcgctcgcgggcggcagcttc
ggcacctggcggcagtcgctgcagctcagcggctcgcagggcgcggtcgactacatgctc
gacgccagccgcttccgcaccgacggctggcgcgagcacagcgccgcgcggcgcgacatc
gccaacggcaagctgggcatcgcgctggacaacggcgacaagctcacgctggtcatgaac
agcgtgcgcatcgacgcgcaagacccgctcggcctcacggccgaccagtacgcgctggcg
ccgcgcaacgcgccgctcgccacccagtacgacacgcgcaagacggtcgagcagacgcag
gccgggctgctctacgagcgccgcatcgacgccggccaggcgctgcgcctcatggtctat
ggcgggcagcgcgagaccacgcagtaccagtcgattccgccttcggcgcagcagaacccg
ctgcatgcgggcggcgtgatcgacctgtcgcggcagtacggcggcatcgacctgcgctgg
agcgccgcgctgcagcttgccgaccggccgctcgacgtggttgccgggctgggctacgac
aacctgcgcgaaaagcggcgcggatacgagaactacctgggcccgctcgcaaacccggtg
ctgggcgtgcaggggcgcctgcgccgcaacgagctcaacaccgtctggaacctcgacccc
tacgcgcaggcgacatggcgccttgccgagcgctggacgctggaggccggcgtgcgccgc
agcagcgtgcacttcgattcgcacgaccgctacatcatcggcgccaaccgcgacgacagc
ggcagcgcgcgctacggcaagacgctgcccgtggcgtcgctgcgctaccaggccacgccc
gacctcgcgctgtacggttccgccggccgcggcttcgagacgccgacgctcaacgagctg
tcgtaccgcgcgaacggcgccagcggcctcaacttcgcgctgcggccttcgatgaacgac
agcctggaggtcggcgccaaggcccggctcgcgggcggcctgctgacggcggcgctgttc
cagacccgcacgcgcgacgagatcgtgaccgacaccaacgtcggcggccgcgcgaccttc
cagaacgcgggccgcaccaagcgcaacggcttcgagctgggctggcagcacgagaccgcc
agccattggcgcacgcagctggcctacacgtggctggacgcgacttaccgcgatgccttc
tgctcgccgtcgccttgcgtcacggccaacaccgtggcgtcgggcaaccgcattcccggc
atcgcgaggcaatcgcttttcgcgtcgctgggctgggtgccgcccgagggctggcgtgcc
ggcgcggaagtgcgagcgctcgggcgcatcctggccaacgacgtcaacacggccgtggcg
tcgggctatgcggtggcggcggtctatgccggctacctgaagaagtgggagcgctgggag
ctcaacgccttcgcgcgcgtcgacaacctgttcgaccgccgctacgtaggctcggtgatc
gtcaatgaaggcaacgggcgtttctacgaaccggcgctgggccggaactggaccgtgggg
ttgagcggcgcctacaggttctga
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