Variovorax sp. PMC12: C4F17_17165
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Entry
C4F17_17165 CDS
T05380
Name
(GenBank) tripartite tricarboxylate transporter permease
KO
K07793
putative tricarboxylic transport membrane protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_17165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_17165
Transporters [BR:
vam02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C4F17_17165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TctA
Motif
Other DBs
NCBI-ProteinID:
AVQ82543
UniProt:
A0A2P1VBL8
LinkDB
All DBs
Position
1:3715767..3717278
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AA seq
503 aa
AA seq
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MDLIHNLSIGFGVAFTFTNLLYCLVGCILGTLIGVLPGIGPVATIAMLLPATYALPPVSA
LIMLAGIYYGAQYGGSTTAILVNLPGESSSVVTCIDGYQMARQGRAGPALAAAGLGSFFA
GCVGTLILAAFAPPLTELAFKFGPAEYFSLMVLGLIGAVVLASGSLIKAVAMIVLGLLLG
IVGTDVNSGVARYSFDIPELTDGIGFVVIAMGVFGYGEIIGNLSQPDDEREVFTHKVKGL
WPTKDDFKRMLPAVLRGTALGSALGILPGGGALLASFASYALEKKIKMRPGEVPFGKGNI
RGVASPESANNAGAQTSFIPLLTLGIPPNAVMALMVGAMTIHNIQPGPQVMTSNPELFWG
LIASMWIGNAMLIILNLPLIGMWIKLLTVPYKFLFPAIVLFCAIGVYSTNNNTFDVWMVA
AFGFIGYLFIKLRTEPAPLLLGFILGPMMEENLRRALLLSRGAWSVFVTRPLSAGLLVAA
VALLGIVLLPAIKAKREEAFVEE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggacctgatccacaacctctccatcggtttcggcgttgccttcaccttcaccaacctg
ctgtactgcctggtcggctgcatcctgggcacgctgatcggcgtgcttcccggcatcggc
ccggtcgcgaccatcgcgatgctgctgcccgccacctatgcgctgccccccgtgtcggcg
ctgatcatgctggccggcatctactacggcgcgcagtacggcggttccaccaccgccatc
ctggtgaacctgccgggcgagtcttcgtcggtggtcacttgcatcgacggctaccagatg
gccaggcagggccgcgcgggtccggcgctggccgcggcgggcctgggctcgttcttcgcg
ggctgcgtgggcacgctgatcctggctgccttcgcgccgccgctgaccgaactggccttc
aagttcggcccggccgagtatttctcgctgatggtgctgggcctgatcggcgcggtggtg
ctggcttcgggctcgctgatcaaggcggtggccatgatcgtgctgggcctgctgctgggc
atcgtcggcaccgacgtgaactccggcgtggcgcgctacagcttcgacattccggaactc
accgacggcatcggcttcgtggtcatcgccatgggcgtgttcggctacggcgaaatcatc
ggcaacctctcgcagccggacgacgagcgcgaagtgttcacgcacaaggtcaagggcctg
tggccgaccaaggacgacttcaagcgcatgctgcccgcggtgctgcgcggcactgcgctg
ggttcggcactgggcatcctgcctggcggcggcgcgctgctggcctcattcgcctcttat
gcgctggagaagaagatcaagatgcgccccggcgaagtgcccttcggcaagggcaacatc
cgcggcgtggcgtcgccagaatcggccaacaacgccggcgcgcagacctccttcatcccg
ctgctgacgctgggcattccgcccaacgcggtgatggcgctgatggtgggtgccatgacg
atccacaacatccagccgggcccgcaggtgatgaccagcaaccccgagctgttctggggc
ctgatcgcctcgatgtggatcggcaacgcgatgctgatcatcctgaacctgccgctgatc
ggcatgtggatcaagctgctgacggtgccctacaagttcctgttcccggccatcgtgctg
ttctgcgccatcggcgtgtactcgaccaataacaacaccttcgacgtgtggatggtggcg
gccttcggcttcatcggctacctgttcatcaagctgcgcaccgagccggcgccgctgctg
ctgggcttcatcctgggcccgatgatggaagagaacctgcggcgcgcgctgctgctgtcg
cgcggcgcatggagcgtgttcgtcacgcggccgctgtccgccgggctgctggtggctgcc
gtggcgctgctggggatcgtgctgctcccggccatcaaggccaagcgcgaggaagccttc
gtcgaggaatag
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