Variovorax sp. PMC12: C4F17_22490
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Entry
C4F17_22490 CDS
T05380
Name
(GenBank) 3-methylcrotonyl-CoA carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00280
Valine, leucine and isoleucine degradation
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C4F17_22490
Enzymes [BR:
vam01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
C4F17_22490
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Biotin_lipoyl_2
ATP-grasp
Dala_Dala_lig_C
HlyD_3
HlyD_D23
LAL_C2
GCV_H
RnfC_N
ATP-grasp_4
ATP-grasp_3
GARS_A
PTS_EIIA_1
NQRA
DUF2118
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AVQ83497
LinkDB
All DBs
Position
1:4829062..4831086
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AA seq
674 aa
AA seq
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MFKKILIANRGEIACRVAATARRMAIRTVAVYSDADAHANHVRACDESVHLGGSAPKDSY
LRWEKILEAAKATGAEAVHPGYGFLSENEEFAQACADAGLVFIGPPPSAIKAMGLKAESK
QLMEKAGVPLVPGYHGHDQDPQLLQREADRIGYPVLIKASAGGGGKGMRAVDKAEDFAAA
LASCQREAINSFGDDAVLIEKYVQRPRHIEIQVFGDTHGNYVYLFERDCSVQRRHQKVLE
EAPAPGMTEAMRKQMGDAAVAAARAVNYVGAGTVEFIVEQREGGEMNFFFMEMNTRLQVE
HPVTEAITGLDLVEWQLRVASGEALPAKQADLKIHGHAIEARICAENPDNNFLPATGTLR
VYRKPQATAFQRMALTGASAGVRIDDGVREGGEISPFYDSMIAKLIVHGATRDEALARLD
AALAQVQIVGVQTNVQFLRGILATESFSRANLDTALIERERAVLFDRETLGLPLAAAAAI
TRTLVTEWPGKMPDPFARRDGWRSLGEYRRHFDFEFRGAAQAAVLTYKRDGGLWLEAGGT
EGPLVIGQFPSGEFEVEFAGMRQTLDVHLDGATAHVFASKGATKITTIDRLAHAGDAQAE
GGRLTAPMPGKVVSFAVKAGDKVSRGQPLAVMEAMKMEHTIAAPADGTVEELMFAPGEQV
AEGDELLRMAAATV
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaagatcctcattgcgaaccgtggcgagatcgcctgccgcgtcgcggcaact
gcgcgccgcatggccattcgcacggtcgccgtgtattccgatgccgacgcgcatgccaac
cacgtgcgtgcctgcgacgagtcggtgcacctcggcggcagcgcgcctaaagacagctac
ctgcgctgggaaaagatcctcgaagccgccaaggccacgggcgccgaggcggtgcacccg
ggctacggcttcctgagcgagaacgaagagttcgcgcaagcctgcgccgacgccggcctg
gtcttcatcggcccgccgccctcggccatcaaggccatgggactgaaggccgaatcgaag
caactgatggagaaagccggcgtgccgctggtgcccggctaccacggccacgaccaggac
ccgcaactgctgcagcgcgaggccgaccgcatcggctacccggtgctcatcaaggcgagc
gcgggcggcggcggcaagggcatgcgcgcggtcgacaaggcggaggacttcgctgccgcg
ctcgcatcgtgccagcgcgaagccatcaacagcttcggcgacgacgcggtgctgatcgag
aaatacgtgcagcgcccgcgccacatcgagatccaggtgttcggcgacacgcacggcaac
tacgtctacctgttcgagcgcgactgctcggtgcagcgccgccatcagaaggtgctggaa
gaagctcccgcgcctggcatgaccgaggccatgcgcaagcagatgggcgatgccgctgtg
gcggccgcgcgcgccgtgaactacgtgggcgcgggcacggtggagttcatcgtcgagcag
cgtgaaggcggggagatgaacttcttcttcatggagatgaacacgcgtcttcaagtcgag
cacccggtgaccgaagccatcacaggcctcgacctcgtcgaatggcaactgcgcgtggcc
tcgggcgaggcattgcccgcgaagcaggccgacctgaagatccacggccacgccatcgag
gcgcgcatctgcgccgagaaccccgacaacaacttcctgcccgccaccggcaccctgcgc
gtgtaccgcaagcctcaggcgacggccttccaacgcatggccctgaccggcgcgagcgcc
ggggtgcgcatcgacgacggcgtgcgcgagggcggcgagatctcgccgttctacgactcg
atgatcgccaagctcatcgtgcacggcgccacgcgcgacgaagcactggcgcggctcgac
gccgcgctggcgcaggtgcagatcgtgggcgtgcagaccaacgtgcagttcctgcgcggc
atcctggcgaccgaatcgttctccagggccaacctcgacaccgcgctgatcgaacgcgag
cgcgcggtgctgttcgaccgcgagacgctgggcctgccgctggccgccgccgccgccatc
acgcgcacgctggtcaccgaatggcctggcaagatgcccgacccctttgcccgccgcgac
ggctggcgctcgctgggcgagtaccggcgtcatttcgacttcgagttccgcggtgcggcg
caggccgccgtgctcacctacaagcgcgacggcggcctgtggctggaagccggcggcacc
gagggtccgctggtgatcggccagttcccgtcgggcgaattcgaggtcgagttcgccggc
atgcgccagacgctcgacgtgcacctcgacggcgccaccgcccacgtcttcgcatcgaag
ggcgcgacgaagatcaccaccatcgaccgcctcgcccacgctggcgacgcccaggccgaa
ggcggccggctcaccgcgcccatgccgggcaaggtggtgtcgttcgccgtcaaggccggc
gacaaggtcagccgcggccagccgctcgcggtgatggaagccatgaaaatggagcacacc
atcgcggcaccggccgacggcaccgtggaggaactgatgttcgcccccggcgagcaggtg
gccgaaggcgacgaattgttgcgaatggccgccgcaacggtttaa
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