Variovorax sp. PMC12: C4F17_27710
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Entry
C4F17_27710 CDS
T05380
Name
(GenBank) non-ribosomal peptide synthetase
Organism
vam
Variovorax sp. PMC12
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
PP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AVQ84862
UniProt:
A0A2P1VI57
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All DBs
Position
2:complement(40940..46231)
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AA seq
1763 aa
AA seq
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MHPMDFVSHLRDLAARRPDDTALIAVTDRDGAALDTPISYRRLDTRVRGLAAYLQQTFGR
GERALIMLDNGDDYVVSFFACLYAGLIAVPVFPPESTRKRHLGKLEGIAADAGACCVLTH
ATIQAAIAGVGGAFVDVPLIPVDGIGAEDAERWTPHTPSATDIAFLQYTSGSTSAPKGVM
VTHANLMANMRAIEEGLSVGPDDIFATWLPLNHDMGLIGGLLQPLHRGIPVALMSPRYFL
ERPVRWLEAISRHRATISGGPDFAYRLCLDRVSEAQLQKLDLSSWGLAFSGAEPVRADTL
REFRKQFAPAGFAAGAVYPCYGLAESTLFVTGGERGAGMVARDFSSSGLARGIVETGTEE
SATLVGCGRAVTGHAVRIVDPVTLAVRDAGHVGEIWASGPSIGSGYWNKPQVSRETFVAH
DGAIWLRTGDLGFLHDGQLYVAGRIKDMIIVRGHNLYPQDIERMIELEVDIVRKGRVAAF
AVDGPEGEGIGLAAEVSRSTQKLVKPEALVETLSAAVGEQFGEPLSVVMLLNPGGMPKTT
SGKLQRGACRQGWIDRTADAYAMYAHGAFVLGDSAAAPAPAIERPLDDVEKAVVAIWSEV
LRRDAQTAPPRDTHFFIHGGNSLAATQVAARIADRWEIEFPVRALFERPRLGALAAEVRR
LLATGLRKPRSVIPVMPAEHRAKPLALSHAQERQWFLWQLDPKSTAYHVSVALDLAGVLD
ADALDAALGDLVDRHESLRTVFRAAADGTVAQVIAPALRLALRRIDLGAWPAEAREAAAA
EHASQCHAEPFDLGEGPLLRAALIRIDEARHLLVVVMHHIVSDGASMQVLVEELGAAYAA
RAKGAAPQFKPLPVQYADYALWQRDWLAAGEAERQLAYWRGQLGADHPVLALPTDHPRHA
VAAYRAAGHAFEFDAELTRRLRATAQAHGATFFMALLAGFQALLHRYTGKQDVRVGVPVA
NRQRPETAGLIGFFVNTQVLRSTLQGRMSLVQLLAQTREAALGAQAHQDLPFEQIVEALQ
PQRSLSHSPLFQVMFNHLREDTGMPRLLPGLEAREHRIADSAAQFELMLDIREHADGSTG
AVLTYAAELFEPTTIARMATHYRALLEALAADPAQALGDVQWLDATERHRLREWSAGEPQ
APHAQPVHRLFEAQARATPGAIALIDGDTQLSYAVLNARANRLAHRLVRQGVVPDRTVAV
AIQAPADRVAGLLGVLKAGGTYLPLDPSHPPQRLAQLLEDSGARVLLTDSANADALDAGG
IARVVLSEALAQGAEPATDPDIALHDAHLAYVIYTSGTTGRPKGVAVAHGAISMHVQAMA
RACGMRAEDRSLQFALPHVDASIEQCLLPLVAGAALVVQPQWCSLAGELDALLQRHRVSV
VDLPPAYARQLMQGQVPFAHAVRLALFGGEAWTGEDIALIRRVLRPGQIVNAYGPTEAVI
TPTAWHGTADDAEQAPQGYVPIGRPVGRRTAHVLDANLQPLPQGVPGELYLGGEGLARGY
LGRAALTAERFVADPFDAAGGRLYRTGDLVRWRGDGQLEYLGRLDHQVKVRGFRIELAEI
EARLREHAAVREALVLVHDGAAGASLVAYVSPAPAAQIDTAALREQLGRVLPDYMVPSAF
VALDSFPLTAGGKVDRRALPAPALPDRQDYEAPQGDVAQALASIWTELLKVEKVGMHDNF
FDLGGNSLLVIRMHRLMEDRLSPGLTVVDLFKFPTVGALARRIEQGRGAAQAARNDDGDS
EQARAQRQRAALLQRRRPTERSF
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccatggacttcgtgagccacctgcgcgacctggctgcacggcggcccgacgac
accgcgctcatcgccgtgaccgaccgcgacggcgccgccctggacacgcccatctcctat
cgccggctcgacacgcgcgtgcgcggcctcgcggcgtatctgcaacagactttcggccgc
ggcgaacgcgcgctgatcatgctggacaacggcgacgactacgtcgtgagcttcttcgcc
tgcctctatgccggcctcatcgccgtgcccgtgtttccgccggaatccacgcgcaaacgg
catctcggcaagctcgaaggcatcgcggccgacgccggcgcctgctgcgtgctgacccac
gccaccatccaagcggcgatcgccggcgtgggcggggccttcgtcgacgtgccgctgatc
cccgtggacgggatcggtgccgaagacgccgaacgctggacgccgcataccccctctgcc
actgacatcgccttcctgcaatacacctccggctccacctcggcgcccaagggcgtcatg
gtcacgcatgccaacctcatggcgaacatgcgtgcgatcgaagaagggctctcggtcgga
cccgacgacatcttcgcgacctggctgccgctgaaccacgacatggggctgatcggcggc
ctgctgcagccgctgcatcgcggcattcccgtcgcgctgatgtcgccacgctatttcctg
gagcggcccgtgcgctggctcgaagccatctcgcgccaccgcgcgaccatcagcggcggc
cccgacttcgcctatcgcctgtgcctcgaccgcgtgtccgaagcgcagttgcagaagctc
gacctgtcgagctggggcctggcgttttccggtgccgagcccgtgcgcgccgacacgctg
cgcgagttcaggaagcagttcgcacccgcaggatttgccgccggcgcggtgtacccctgc
tatggcctggccgagtccacgctgttcgtgacgggcggcgagcgcggcgccggcatggtg
gcgcgcgacttctccagcagcggcttggcccgcggcatcgtcgaaaccggcaccgaagaa
agtgccaccctcgtcggctgcggccgcgccgtgacgggccatgccgtgcgcatcgtcgat
cccgtcacgctggcggtgcgcgatgcgggccatgtcggcgaaatctgggccagcggcccc
agcatcggcagcggctactggaacaagccgcaggtgtcgcgggagaccttcgtcgcgcac
gacggcgcgatctggctgcgcaccggcgacctcggcttcctgcacgacggccagctctac
gtggcggggcgcatcaaggacatgatcatcgtgcgcggccacaacctgtacccgcaggac
atcgagcgcatgatcgaactcgaggtcgacatcgtgcgcaagggccgtgtggcggccttc
gccgtcgacggccccgagggggaaggcatcgggctggccgccgaggtatcgcgcagcacg
cagaagctggtgaagcccgaagcgctggtcgagacgctcagcgccgcggtgggcgagcag
ttcggcgagccgctgtccgtcgtcatgctgctgaaccctggcggcatgcccaagaccacg
agcggcaagctgcagcgcggtgcatgccgccagggctggatcgaccgcaccgccgacgcc
tatgcgatgtatgcgcacggtgcgttcgttctcggcgattccgccgcggcgcccgcaccc
gccatcgagcggccgctcgatgacgtagagaaggccgtcgtcgcgatctggagcgaagtg
ctgcgccgcgacgcacagaccgcgccgccgcgcgacacgcacttcttcatccacggaggc
aactcgctcgccgcgacgcaggtggcggcccgcatcgccgatcgatgggagatcgagttt
ccggtgcgcgcgctgttcgagcggccgcgcctcggcgcgctggctgcggaagtgcgccgc
ctgctcgccaccggcctgcgcaagccgcgcagcgtgatccccgtgatgccggccgagcat
cgtgcgaagccgctcgcgctgtcgcacgcgcaggagcgccagtggttcctgtggcagctc
gacccgaaaagcaccgcctaccacgtgagcgtggcgctggatctggccggcgtcctggac
gccgatgcgctggacgcggcgctcggcgacctggtcgatcgccacgagagcctgcgcacc
gtgtttcgcgcggcggcggacggcacggttgctcaggtcattgcgccggcgctgcggctc
gcgctgcggcgtatcgacctcggcgcatggcccgccgaagcgcgggaggccgctgccgcc
gagcatgccagccagtgccacgccgagcccttcgacctcggtgaaggcccgctgctgcgc
gcggcgctgatccgcatcgacgaagcccggcacctgctggtcgtcgtcatgcatcacatc
gtgtccgatggcgcttcgatgcaggtgctggtcgaggaactcggcgccgcctatgccgcc
cgtgcgaaaggcgcggcaccgcagttcaagccgctgccggtccagtatgccgactacgcc
ctctggcagcgcgactggctcgccgccggcgaggccgagcgccagctcgcgtattggcgc
ggacagctgggcgccgaccatcccgtgctggctctgcccacggaccatccccggcatgcg
gtcgcggcctaccgcgcggccggccatgccttcgagttcgacgccgaactcacccggcgc
ctgcgcgccaccgcgcaggcgcacggcgcgacattcttcatggcgctgcttgccggcttc
caggcgctgctgcaccgctacaccggcaagcaggacgtgcgtgtcggcgtgccggtcgcc
aaccgccagcggccggaaaccgccgggctgatcggcttcttcgtcaatactcaggtgctt
cgcagcacgttgcagggccgcatgagccttgtgcaactgctggcgcagacacgggaagcc
gcgctcggcgcgcaggcgcaccaggacctgccgttcgaacagatcgtcgaggccctgcag
ccgcagcgcagcctgagccatagccctctgttccaggtgatgttcaaccacctgcgcgaa
gacacgggcatgccgcgcttgctgcccggcctggaggcgcgcgagcaccgcatcgccgac
agcgccgcgcagttcgaactcatgctcgacatccgcgaacatgccgacggaagcaccggt
gcggtgctcacctatgcggccgaactgttcgagccaaccaccatcgcgcgcatggccacg
cactaccgcgcgctgctggaagcgctggcggccgatcccgcgcaggcgctgggcgacgtg
cagtggctcgatgccaccgagcggcatcggctgcgcgaatggtcggccggcgagccgcag
gcgccgcacgcgcagcccgtgcaccgcctgttcgaggcgcaggcgcgagccacgcccggg
gccattgccctgatcgacggcgacacccaactcagctacgcggttctgaacgcgcgtgcc
aaccgactcgcgcaccggctggtccgccagggggtggtgcccgaccgcactgtcgcggtg
gccatccaagcaccggccgatcgcgtggctggcctcctcggcgtgctgaaggccggaggc
acctacctgccgctggacccttcgcatcctccgcaaaggcttgcgcagttgctggaagac
agcggcgcgcgcgtgctgctcaccgacagcgccaacgccgatgcgctcgatgcgggcggc
atcgccagggtggtgctcagtgaggcgctggcccaaggcgccgagccggccaccgatcca
gacatcgcgctgcacgacgcccacctcgcctacgtcatctacacctccggcaccacgggg
cggcccaagggcgtggccgtggcacacggcgcgatttcgatgcatgtccaggcaatggcg
cgggcctgcggcatgcgcgcggaagaccggtcgctgcagtttgcgctgccgcatgtcgac
gcatccatcgagcaatgcctgctgccgctggttgcgggtgcggcgctcgtggtgcagccg
cagtggtgctctcttgccggtgaactcgacgccctgctgcagcgacaccgcgtgagcgtg
gtcgacctcccgccggcctatgcacgccaactgatgcagggccaggtaccgttcgcgcat
gccgtgcgccttgcgctcttcggcggcgaggcctggaccggcgaagacatcgcgctgatc
cggcgcgtgctgcgcccggggcagatcgtcaacgcctacggcccgaccgaagccgtcatc
acgcccaccgcctggcacggcacggcggatgacgcggagcaggcgccgcagggctacgtg
cccatcggccgtcccgtgggccgtcgcaccgcgcatgtgctcgacgcgaacctgcagccg
cttccccagggcgttcccggcgagctgtacctcggcggcgaagggctggcgcgcggctac
ctcggccgcgcggccctcacggccgaacgcttcgtcgccgatcccttcgatgcggcgggt
ggcaggctctaccgcaccggcgacctcgtgcgctggcgcggcgacggccagctcgaatac
ctgggccgtctcgaccaccaggtgaaagtccggggctttcgcatcgaacttgccgaaatc
gaagcgcgcctgcgcgagcacgcggcggttcgcgaggcattggtgctcgtgcacgacggc
gcagccggcgcctcgctggtggcctatgtatcgcccgcacccgccgcgcagatcgacaca
gcggcgttgcgggagcaactgggccgcgtcctgcccgactacatggtgccctcggccttc
gtggcgctcgacagcttcccgctcaccgcgggcggcaaggtagaccgccgcgcgctgccg
gcacccgccttgcccgaccgccaggactacgaggcaccgcagggcgacgtcgcccaggcg
ctggcctcgatctggaccgaactgctcaaggtcgagaaggtgggcatgcacgacaacttc
ttcgatctcggcggcaactcgctgctggtgatccgcatgcaccggctgatggaagaccgg
ctcagtccgggcctgaccgtggtcgatctcttcaagtttcccaccgtcggcgcgctggcg
cgccgcatcgagcagggacgtggcgcggcacaggccgcccgcaacgacgacggcgacagc
gagcaggcgcgcgcccagcgccagcgcgctgccctgctgcagcgccgccgtcccaccgaa
agaagcttctga
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