Vibrio anguillarum 775: VAA_03350
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Entry
VAA_03350 CDS
T01536
Name
(GenBank) Ribosomal large subunit pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
van
Vibrio anguillarum 775
Brite
KEGG Orthology (KO) [BR:
van00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
van03009
]
VAA_03350
Enzymes [BR:
van01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
VAA_03350
Ribosome biogenesis [BR:
van03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VAA_03350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
Orexin
TGS
Motif
Other DBs
NCBI-ProteinID:
AEH32718
LinkDB
All DBs
Position
I:1195585..1196541
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AA seq
318 aa
AA seq
DB search
MAPMSEIRTQVQLIDIDEDMAGQRIDNFLRNQLKNVPKSMVYRILRKGEVRVNKKRIKAE
YKLSAGDVVRIPPVTLEQSDQESNTPNTKLSKVAELEHCIIFEDEHLLILNKPSGTAVHG
GSGLKFGAIEALRALRPEARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTIQKY
YFALVMGQWKSSCKVVNAPLLKNEVNSIVRVNPNGKASETRFKILEQFAQATLVQASPIT
GRTHQIRVHTQYTGHPIAWDDRYGDRRFDAYTAQFGIDRLFLHAANIRFIHPSTEALMDI
NAPLDTQLEQALVKLRNA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccatgagtgaaattagaacccaagtccagctcatcgatatcgatgaagatatg
gctggtcaacgcattgacaattttttgcgtaaccaattaaaaaacgttcccaaaagtatg
gtttaccgaatcctgcgcaaaggagaggttcgtgtaaataaaaaacgcatcaaagcagaa
tataagttatcggctggtgatgtggtgagaataccaccagtgactctcgaacagtcggat
caagagagcaacacacccaataccaaattgagtaaagtcgccgagctagaacactgcatt
atttttgaggatgagcacttacttattctgaataaaccttccggtacggctgttcatggt
gggagtggtttgaaatttggcgcaattgaagcgctgcgggcattgcgcccagaagctcgc
tttttggaattggtgcaccgtatcgatcgcgatacgtcgggcattttattagtggctaaa
aaacgctccgcgctgcgccatctccaagcccagtttagagaaaaaacgattcaaaaatat
tactttgctttagttatggggcaatggaaaagcagctgtaaagtcgtgaatgcgccacta
ttgaaaaatgaagtgaacagcattgtgcgagtcaatccaaacggtaaagcatcggaaacg
cgctttaagatccttgaacagtttgcacaagcaactttggtgcaagccagtccgatcact
ggccgtactcatcagatccgcgttcatactcagtatacagggcacccgattgcgtgggat
gatcgttatggtgaccgccgttttgacgcatataccgcacagtttggcattgaccgatta
ttcttacacgcggccaatattcgttttattcacccttcgacagaggcgttaatggacatt
aatgcaccactcgatactcaactagagcaagcattagtcaaattgagaaacgcttaa
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