Variovorax paradoxus S110: Vapar_1037
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Entry
Vapar_1037 CDS
T00916
Name
(GenBank) Mur ligase middle domain protein
Organism
vap
Variovorax paradoxus S110
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PGA_cap
Mur_ligase_M
Motif
Other DBs
NCBI-ProteinID:
ACS17688
UniProt:
C5CPG7
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All DBs
Position
1:1131030..1135784
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AA seq
1584 aa
AA seq
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MDLLNRARQILAAPDGTLPGAAATPEAGCVVLIAMGDGTSRARVVAGRAESAEQAWQQAS
DAAVALAQRIGMQPRHVRVELVDQVEPMSWGALKARLAGTRRNYFNHGVSFDAKFEVALL
APEINGSAVFYNGTVDHAEPNPGNLRLHAKRRFGAELDFPQDDAAPVWCFTTRAAYADTE
GAWPITPAGQSAGYRTLPEWGAGQVRSLVDSASDYLAAQVKPTGEFHYGWFPCFDRAIPT
YNTLRHASSTYALLEAWELTRSDSQKAAIDRSLSLLTKRLIRQAELPGGTRAAYLLDVGD
EIKLGGNAVCLLALVKYTELTGDPQYLPLMEQLALGIQAMQDPASGRFVHVLNYPSLEVK
DAFRVIYYDGEAAFGLMRLYGLTRDERWLAVVEKAFEHFIAAEHWRAHDHWLSYCVNELT
RVRPETRYYQFGLRNVADYLDFVLERITTFPTLLELMMAAREMVERLAADPALRPLLEGF
DRAKFDRALEHRARYLANGYFWPELAMFFRNPDRITGSFFIKHHSFRVRIDDVEHYLSGY
VAYHRLLKHREASGLPAACGIPQATSAPAPADSGRAPVAVWGGDVNLGRRLHYRLAELGG
PQEMLGGIAALREADLRIANLECVVATTGEQGVEKDESSPYYYRARPEMLAVLAEAGIGM
VATANNHSGDYGAAALMEQQALLDAAGIAHAGTGRNLDEALRPAIGRAGGVRVALFSLDA
TQPRFAATADAPGAAWLPLGDPAAWTATLAPRIAAARAEADVVLVAVHWGANLETAPSQA
EIDVGHAIVDAGADAILGSSAHVLQGIEIYRGRPILHDAGDLLFESVRNDLGDSGVFSLA
LSVRGVEEVVFTPIGVGFGFSRQHTGAPAEAASARFAEQCRALGTEMVPVAGGRCAVRLS
PPERRPALAAAAPAARAPRAIRPLLAPRPEWMADAVPPDAWVPPLQAGPLRLVGVRCAPR
QLVGRRMLWVESFWTADAPVTADLRIQFRAVPLRSTRMPAWGEGMDHEPCDWMWPTSRWE
PGRIYRDRYGLRAPRAGLLESDVLQLELRVRGALAGLPPARRLSIWCGLRVPGAPVPLPA
RPAPVPAALHPGASPTPAPVWTAEHLQRITGGRWLVEPPPGWFVNSVVRGPRHLPLLPPP
ALFVAADYDTLAAHENYSKRLPGNPDRHADLPSLEKKLAGAVVAHAVEGLAPDFPLLQLD
DPIRGMIALGEAARARFKGLVVGVTGTVGKSSTIAMLRDLLPEAARVHTTVDNYNSRVGV
PAMLANLGPDADVCILEMAQSGLWMDRGPISLMARPHVAIITEVGLSQTRQASTLEQTAA
FKSRIFLGLEPGGVAIVPDHIPCLAQVVRAAALTAGAIWVVGPGPDANIRVLDTHPEPGG
GCRVRIATEGRSFEYLFPIASAGLVRNSALAFAALLAMGFDADAACARMPGVRLPASVMQ
VRTLRTRAGIEATLIDDSWNAEVMSMRNAMEFVRTYRRADDAPVQRKIGVLGRIVNLGRD
SQALHRGLAEPLLASGIEHLVTHGAEMRWLREDVPAGLLGPHFDDAEKLADYLGTFLRDG
DLVLLKGDRVGSDFGTIPQRLQQL
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atggatctgttgaaccgcgccaggcagatactggccgccccggacggcacgctgcccggc
gccgccgccacgcccgaggccggctgcgtggtactgattgccatgggcgacggcacgagc
cgcgcgcgcgtggttgccgggcgcgccgaaagcgccgagcaggcctggcaacaggccagc
gatgcagcagttgcgctcgcacagcgcatcggcatgcagccgcgccatgtgcgcgtggaa
ctggtcgaccaggtcgagcccatgagctggggcgcgctgaaggcccgcctggcgggcacc
aggcgcaactacttcaaccatggcgtgtccttcgacgcgaagttcgaggtggcgctgctc
gcgccggagatcaacggcagcgccgtcttctacaacggcaccgtggaccatgccgagccc
aatccgggcaacctgcgccttcatgcgaagcggcgcttcggtgccgaactcgattttccg
caggatgacgcggcgccggtgtggtgcttcaccacgcgcgcggcctatgccgataccgaa
ggcgcgtggccgatcactcccgcgggccagtcggcgggctaccgcacgctgcccgagtgg
ggcgccggccaggtgcgcagcctcgtggacagcgcgagcgactatcttgcggcgcaggtc
aagcccacgggcgagttccactacggatggttcccctgcttcgaccgcgcgattcccacc
tacaacacgctgcgccacgcgagctcgacctatgcgttgctcgaggcctgggagctgacc
cgcagcgacagccagaaggcggccatcgaccgctcgctgtcgctgctgacgaagcggctg
atccgccaggccgagctgccgggcggcacgcgcgcggcctacctgctggacgtcggcgac
gagatcaagctcggcggcaacgcggtgtgcctgctggcgctcgtcaagtacacggagctc
acgggcgatccgcagtacctgccgctgatggagcagctcgcgctcggcatccaggccatg
caggacccggccagcgggcgcttcgtgcacgtgctcaactacccctcgctcgaagtgaag
gacgccttccgcgtcatctactacgacggcgaagccgccttcggcctgatgcgcctgtac
ggcctcacgcgcgacgagcgctggctcgcggtggtcgagaaggccttcgagcatttcatt
gccgcggagcactggcgcgcgcacgaccactggctgagctactgcgtcaacgagctcacg
cgtgttcggcccgagacgcgctactaccagttcgggttgcgcaacgtggccgactacctg
gacttcgtgctggagcgcatcaccacctttccgaccctgctcgagctcatgatggccgcg
cgcgagatggtggagcgcctggccgccgaccccgcgctgcgcccgctgctcgaaggcttc
gaccgcgccaagttcgaccgcgcgctcgagcaccgcgcgcgctacctggccaacggctac
ttctggcccgagctcgcgatgttcttccgcaacccggaccgcatcaccggttcgttcttc
atcaagcaccacagcttccgcgtgcgcatcgacgacgtggagcactatctctcgggctac
gtggcttaccaccggctgttgaagcaccgcgaagcatcgggactcccggctgcgtgcgga
attccccaagccacttctgcgccagcgccggcggacagtggccgcgcgcccgtcgcggtc
tggggcggcgacgtgaacctcggccgccggctgcactaccgcctggcagagctcggcggc
ccgcaggagatgcttggcggcatcgctgcacttcgcgaggcggacctgcgcatcgccaac
ctcgaatgcgtggtcgccaccaccggcgaacagggcgtcgagaaggatgagagcagcccc
tactactaccgcgcccggcccgagatgctcgcggtgctggccgaagcgggcatcggcatg
gtcgccaccgccaacaaccacagcggcgactacggagccgccgcgctgatggagcagcag
gcgctgctggatgccgccggcattgcgcacgcgggcaccgggcgcaacctggatgaggcg
ctgcggccggccatcggccgggccggcggcgtgcgcgtggcgctgttctcgctcgacgcc
acgcagccgcgcttcgcggcaacggccgatgctccgggtgccgcctggctgccgctcggc
gatcccgccgcctggactgccacgcttgcgccgcgcattgccgccgcgcgtgccgaggcc
gatgtggtgctggtggccgtgcactggggcgcaaacctcgaaaccgcgccttcgcaggcc
gaaatcgatgtcggccatgccatcgtcgatgccggtgccgacgcaattctcggcagctcg
gcccatgtgctgcagggcatcgagatctaccgcggccggccgatcctgcacgatgcgggc
gacctgttgttcgaatccgtccgcaacgacctcggggattccggtgtgttctcgctggcg
ctgagtgtgcgcggtgtcgaagaggtggtgttcacgcccattggcgtgggtttcggtttc
tcgcggcagcacacgggcgcgccggccgaggccgcgagtgcgcgcttcgccgagcaatgc
cgcgcactggggaccgaaatggtgccggtggcgggaggccggtgcgcggtgaggctgtcg
ccacccgagcggcggcccgccctcgccgccgcagcgcccgccgcgcgcgcgcctcgcgcc
atcaggccgctcctcgcgccccggcccgaatggatggccgatgcggtgccgcccgacgca
tgggtgccgcctctccaggccgggccgctgcgcctggtgggcgtgcgttgcgcgccgcgc
cagctcgtcgggcggcgcatgctgtgggtggagtctttctggaccgccgacgcgcccgta
acggccgacctgcgcatccagttccgcgcggtcccgctgcgcagcacccgcatgcccgcg
tggggcgaaggcatggaccacgagccctgcgactggatgtggccgaccagccgatgggag
ccgggccgcatctatcgcgaccgctacgggctgcgcgcgcctcgcgccggcctgctggag
agcgatgtgctgcagctcgagctgcgcgtacgcggcgcgctggctgggctgccgcccgcg
cgccggctgtccatctggtgcggcctgcgcgtgcccggtgcgccggtgccattgcccgcg
cggcccgcgcccgtgcccgcggccctgcatcccggtgccagcccgaccccggcgccggtc
tggaccgccgagcatctgcagcgcatcacgggcggccgatggctggtcgagcctccgcca
ggctggttcgtgaactcggtggtgcgcgggccgcgccatctgccgctgctgccgccgcct
gcgcttttcgtcgcggccgactacgacacgctggccgcgcacgagaactacagcaagcgc
ctgcccggcaatccggaccgccacgccgacctgccgtcgctcgaaaaaaagctggcaggc
gcggtggtcgcgcatgcggtggaaggactggctcccgactttccgctgctgcagctggac
gatccgatccgcggaatgatcgcgctcggcgaggcggcgcgcgcgcgtttcaagggcttg
gtggtgggggtgaccggcacggtcggcaagtcgtccaccattgccatgctgcgcgacctg
ctgcccgaagccgcgcgcgtgcacaccaccgtggacaactacaactcgcgcgtcggcgtg
ccggccatgctggccaatctcgggcccgatgcggacgtgtgcattctcgaaatggcgcag
agcggcctgtggatggaccgggggccgatctcgctgatggcgcggccgcacgtggccatc
atcaccgaggtcgggctgtcgcagacccgccaggcctcgaccctcgaacagacggcggcc
ttcaagtcgcgcatcttcctggggctggagcctggcggcgtcgcgatcgtgcccgaccac
attccctgcctcgcgcaggtggtgcgcgccgccgcactcacggcgggcgccatctgggtg
gtggggcccgggccggacgccaacatccgcgtgctcgacacgcaccccgagcccggcggc
ggctgccgcgtgcgcattgcgacggagggccgcagcttcgagtacctgtttcccatcgcg
agtgccgggctggtgcgcaactcggccctggcgtttgccgcgctgctggcgatgggcttc
gatgcggatgccgcctgcgcgcgcatgcccggggtgcggcttcccgcgtcggtgatgcag
gtgcgcacgctgcgcacccgggccggcatcgaggccacgctgatcgacgacagctggaac
gccgaggtcatgtcgatgcgcaacgcgatggagttcgtgcgcacctaccggcgtgcggac
gatgcgccggtgcagcgcaagatcggcgtgctcgggcgcatcgtgaacctcgggcgcgat
tcgcaagccctgcaccgcggccttgccgaaccgctgctggcctccggcatcgagcacctg
gtgacgcacggcgcagagatgcgctggctgcgcgaggatgtaccggccgggctgctcgga
ccgcacttcgacgatgccgagaaactcgcggactacctcggcaccttcctgcgcgacggc
gacctggtgctgctgaagggcgaccgcgtcggttccgacttcggcaccatcccccaaagg
ctgcagcagctgtga
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