Variovorax paradoxus S110: Vapar_1219
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Entry
Vapar_1219 CDS
T00916
Name
(GenBank) alanine racemase domain protein
KO
K01753
D-serine dehydratase [EC:
4.3.1.18
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00260
Glycine, serine and threonine metabolism
vap00470
D-Amino acid metabolism
vap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Vapar_1219
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Vapar_1219
Enzymes [BR:
vap01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.18 D-serine ammonia-lyase
Vapar_1219
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
D-ser_dehydrat
Ala_racemase_N
PI-PLC-C1
Motif
Other DBs
NCBI-ProteinID:
ACS17870
UniProt:
C5CQP4
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All DBs
Position
1:1332030..1333343
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AA seq
437 aa
AA seq
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MNTMTDTTADPEFNDPLLGSNFKGYPRTQPPRRRSEVGAAGWNVLAGDLPLPLAVLKREA
LEHNLAWMQSRVRAWGIDLAPHGKTTMSPQLFRRQLDAGAWGLTFATVTQLAVGVAAGAR
RTLIANQVVSDEDLAGIQLLLHAHADLRVVFLVDSLAQLALIEDWSKRHPESVPFEVMLE
IGVEGARTGCRTHEEAVALATRLRASDAAKLVGIETYEGQGATGSSEADAAYASALMDRV
EAIARHCDTQQLFETDEVLVSAGGSAIFDLVAGRLKPALGSPVRGLLRSGCYVTHDHGFY
KRMVSAVDERLGCDCGESLRPAMEVWATVQSRPEPGLAILAVGKRDISFDLSMPVPIARA
ARGMLEAQAVPAGWKITALNDQHAYLRWDAAEEAQAPVVGDRVGLGISHPCTTFDKWHWM
PVVEENYRVSDAVAMHF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccatgaccgacaccaccgccgacccggaattcaacgacccgctgctgggcagc
aacttcaagggctacccgcgcacccagccgccgcgccgccgcagcgaagtcggcgccgcg
ggatggaacgtgctcgcgggcgacctgccgctgccgctggccgtactcaagcgcgaggcg
ctcgagcacaacctggcctggatgcagtcgcgcgtacgcgcctggggcatcgacctggcg
ccgcacggcaagaccaccatgtcgccgcagctcttccggcgccagctcgacgccggcgcc
tggggcctgaccttcgccaccgtcacgcagctggcggtgggcgtggccgccggcgcgcgc
cgcacgctcatcgccaaccaggtggtgagcgacgaagacctggccggcatccagctgctg
ctgcacgcgcacgccgacttgcgcgtggtgttcctggtcgattcgctcgcgcagctcgca
ttgatcgaggactggtccaagcgccatcccgagagcgtgcctttcgaggtgatgctggag
atcggtgtggagggcgcacgcaccggctgccgcacgcatgaggaagccgtggcgcttgcc
acgcggctgcgtgccagcgatgcggccaagctcgtgggcatcgaaacctacgaagggcag
ggcgccacgggttccagcgaagccgacgcggcctacgccagcgcgctgatggaccgcgtg
gaagccatcgcgcgccattgcgacacgcagcaattgttcgagaccgacgaggtgctggtc
tcggccggcggctcggccatcttcgacctggtggcggggcgcctgaagcccgcgctgggt
tcgccggtgcgcggcctgctgcgctcgggctgctatgtgacgcacgaccacggcttctac
aagcgcatggtgagcgcggtggacgagcgcctgggctgcgattgcggcgagagcctgcgc
cccgcgatggaggtgtgggccacggtgcagtcgcggcccgagcccggcctggcgatcctg
gccgtgggcaagcgcgacatttccttcgacctgtcgatgccggtgcccatcgcacgcgcc
gcacgcggcatgctcgaagcgcaggcggtgcccgccggctggaagatcaccgcgctcaac
gaccagcacgcctacctgcgctgggacgccgccgaagaggcgcaggcccccgtggtcggc
gaccgcgtgggcctgggcatctcgcacccctgcaccaccttcgacaaatggcactggatg
ccggtggtcgaagagaactaccgcgtgagcgacgccgtcgccatgcatttctga
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