Variovorax paradoxus S110: Vapar_4221
Help
Entry
Vapar_4221 CDS
T00916
Name
(GenBank) type II secretion system protein
KO
K02653
type IV pilus assembly protein PilC
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vap02044
]
Vapar_4221
02035 Bacterial motility proteins [BR:
vap02035
]
Vapar_4221
Secretion system [BR:
vap02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Vapar_4221
Bacterial motility proteins [BR:
vap02035
]
Pilus system
Pilus assembly proteins
Vapar_4221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF4536
MIP-T3_C
Motif
Other DBs
NCBI-ProteinID:
ACS20834
UniProt:
C5CXX8
LinkDB
All DBs
Position
1:4461735..4462964
Genome browser
AA seq
409 aa
AA seq
DB search
MATVASTRTSNTLKEFVYEWEGKDRNGKLVRGELRAAGENQVQAALRRQGVLASKIKKRR
MRSGKSIKPKDIAIFTRQLATMMKAGVPLLQSFDIVGRGNANPSVAKLLNDIRSDVETGT
SLSSAFRKFPKYFDNLYCNLVEAGEAAGILEDLLDRLATYMEKTEAIKSKIKSALMYPTS
VVVVAFVVVAIIMIFVIPAFKQVFTSFGADLPAPTLFVMAMSEFFVSYWWLIFGVVGGGT
YFFLQAWKRNERVQRVMDRALLRVPIFGTLIEKSCVARWTRTLATMFAAGVPLVEALDSV
GGASGNTVYGDATAKIQQEVSTGTSLTTAMTNVNLFPSMVIQMTAIGEESGSIDHMLGKA
ADFYESEVDDMVAGLSSLMEPIIIVFLGVIIGGIVVSMYLPIFKLGQVV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtggcatccacccgcacctcgaacacgctcaaggaatttgtctacgagtgg
gagggcaaggaccgcaacggcaagctggtgcgcggcgaactccgggccgccggcgagaac
caggtgcaggccgccctgcggcgccagggcgtcctggcgtccaagatcaagaagcgccgc
atgcgctcgggcaagagcatcaagcccaaggacatcgcgatcttcacgcgccagctggca
accatgatgaaggccggcgtgccgctgctgcagtccttcgacatcgtgggccgcggcaat
gcgaacccgagcgtggccaagctgctcaacgacatccgcagcgacgtggaaaccggcacc
tcgctgtcgtccgccttccgcaagtttccgaagtacttcgacaacctctactgcaacctg
gtggaagccggcgaagcggccggtatcctggaagacctgctggaccgcctggccacctac
atggaaaagactgaggcgatcaagtcgaagatcaagtcggcgctgatgtatcccacttcc
gtggtggtggtcgcgttcgtggtggtggccatcatcatgatcttcgtgattccggccttc
aagcaggtgttcacctcgttcggcgccgacctgcccgcgcccacgctgttcgtgatggcc
atgagcgaattcttcgtctcctactggtggctgatcttcggcgtggtcggcggcggcacc
tacttcttcctgcaggcctggaagcgcaacgaacgcgtgcagcgggtcatggaccgcgcg
ctgctgcgcgtgccgatcttcggtacgctgatcgagaagtcgtgcgtggcccgctggacc
cgcacccttgcgaccatgttcgcggccggcgttccgctggtcgaggcgctcgactcggtg
ggcggcgcctcgggcaacaccgtctacggcgacgccacggccaagatccagcaggaagtc
tcgaccggcaccagcctcacgacggccatgaccaacgtcaacctgttcccctcgatggtg
atccagatgacggccatcggcgaggagtccggctcgatcgaccacatgctcggcaaggcc
gccgacttctacgagtccgaggtggacgacatggtggccggcctctcgagcctgatggag
cccatcatcatcgtgttcctgggcgtgatcatcggcggcatcgtggtgtcgatgtacctg
ccgatcttcaagttgggccaggtcgtttga
DBGET
integrated database retrieval system
