Variovorax paradoxus S110: Vapar_5202
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Entry
Vapar_5202 CDS
T00916
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vap03032
]
Vapar_5202
Enzymes [BR:
vap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Vapar_5202
DNA replication proteins [BR:
vap03032
]
Prokaryotic type
DNA Topoisomerases
Vapar_5202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
SWIB
Toprim
OrfB_Zn_ribbon
PADR1_Zn_ribbon
HC2
Motif
Other DBs
NCBI-ProteinID:
ACS21804
UniProt:
C5CRC8
LinkDB
All DBs
Position
1:5523766..5526708
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AA seq
980 aa
AA seq
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MKTLVIAEKPSVAQDIVRALTPVAGKFDKHDEHFENDSYVVTSAVGHLVEIQAPEEFDVK
RGKWSFANLPVIPPHFDLKPVDKTKTRLNAVVKQAKRKDVTQLINACDAGREGELIFRLI
EQYAGGKTGLNKPVKRLWLQSMTPQAIRDGFDALRTEKQMQGLADAARSRSEADWLVGIN
GTRAMTAFNSRDGGFFLTTVGRVQTPTLSVVVEREEKIRKFVSRDYWEIHGVFQAEAGQY
PGKWFDANFKKPPPGPDGTADAEIRADRVWSEREAREIADAARGKPASVTEESKPTTQAS
PMLFDLTSLQREANGRFGFSAKTTLALAQSLYERHKALTYPRTDSRALPEDYLPVVKDTM
KMLAESGMKHLAPFAQQAVDGSYVKPNKRIFDNAKVSDHFAIIPTLQAPSGLSDAEQKLY
DFVVRRFMSVFFPSAEFQVTTRISTVEAGGKKYPFRSDGKVLVKPGWLAIWGKEAISDDD
EKDGKNLVVVKPGETVKTESADLKALKTRPPARYSEATLLGAMEGAGKTIDDDELREAMQ
EKGLGTPATRAATIEGLITEKYMLREGRELIPTAKAFQLMTLLRGLGVEELSKAELTGEW
EYKLAQMEKGALSRDAFMREIAEMTQHIVKKAKEYDRDTVPGDYATLSTPCPNCGGVVKE
NYRRYSCTGKAGQEPCGFSFGKSPAGRTFEVAEAEVLLRDKHIGPLEGFRSKAGWPFTSE
IVLKYDEEAKNWKLEFDFGDDKNADTGEIVDFSEQDTVGPCPICGAPVFEHGSNYVCEKS
VPTTAQPTPSCTFKTGKIILQQPVERAQMEKLLATGKTDLLDKFVSMRTRRAFKAFLTWN
AEEGKVTFEFAPREGGSKFPPRKTFGKAAPAGKTAAAKKVAAKKTPAAKKAPAAKKAAAP
RKPGAGLKPSDSLAAVIGAEPVARTEVIKKLWDYIKANGLQDAANKRAINADAKLKPVFG
KDQVTMFELAGIVGKHLSAP
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccttggtaatcgcagaaaagccgtcggtggcacaggacatcgtccgtgcactc
acgcccgtggccggcaagttcgacaagcatgacgagcatttcgagaacgacagctacgtg
gtaaccagcgcggtcggccacctggtcgaaatccaggccccggaggagttcgacgtcaag
cggggcaagtggagcttcgcgaacctgccggtgattccgccgcatttcgacctgaagccg
gtcgacaagaccaagacgcgcctgaacgccgtggtcaagcaggccaagcgcaaggacgtg
acgcaactcatcaacgcctgcgacgcgggccgcgagggcgagctgatcttccgcctgatc
gagcagtacgcgggcggcaagaccggcctgaacaagcccgtgaagcgcctgtggctgcag
tcgatgacgccgcaggccatccgcgacggcttcgacgcgctgcgcaccgaaaagcagatg
cagggcctggccgacgccgcgcgctcgcgctcggaggccgactggctggtgggcatcaac
ggcacgcgcgccatgacggccttcaattcgcgcgacggcggcttctttttgacgaccgtg
ggccgcgtgcagacgcccacgctgtcggtggtggtcgagcgcgaggaaaagatccgcaag
ttcgtgagccgcgactactgggaaatccacggtgtgttccaggccgaggccggccagtac
ccgggcaagtggttcgatgccaacttcaagaagccgccgcccggccccgacggcacggcc
gacgccgagatccgcgccgaccgcgtgtggagcgagcgcgaggcgcgcgagatcgccgat
gcggcgcgcggcaagcccgccagcgtcaccgaggaaagcaagcccaccacgcaggcttcg
ccgatgctgttcgacctcacctcgctgcagcgcgaggccaacggccgcttcggcttctcg
gccaagaccacgctggcgctggcgcagagcctgtacgagcgccacaaggcgctgacctat
ccgcggaccgactcgcgcgcactgcccgaggactacctgccggtggtcaaggacaccatg
aagatgctcgccgagagcggcatgaagcacttggcgcccttcgcgcagcaggcggtcgac
ggcagctacgtgaagccgaacaagcgcatcttcgacaacgccaaggtgtcggatcacttc
gcgatcattcccacgctgcaggcgccgagcggcctgtccgacgccgagcagaagctctac
gacttcgtggtgcgccgcttcatgtcggtgttcttcccgagcgccgagttccaggtgacc
acccggatcagcacggtggaggccggcggcaagaagtacccgttccgcagcgacggcaag
gtgctggtcaagccgggctggctcgcgatctggggcaaggaagccatcagcgacgacgac
gagaaggacggcaagaacctggtggtggtgaagccgggcgaaacggtgaagaccgaatcg
gccgacctgaaggcgctgaagacccggccgcccgcgcgctattcggaagccacgctgctg
ggcgcgatggaaggcgccggcaagaccatcgacgacgacgagctgcgcgaggccatgcag
gaaaaaggcctgggcacgccagccacgcgcgcggccaccatcgaaggcctgatcaccgag
aaatacatgctgcgcgaaggccgcgagctgatccccacggccaaggccttccagctcatg
acgctgctgcgcggcctgggcgtggaagaactctccaaggccgagctcacgggcgagtgg
gaatacaagctcgcgcagatggagaagggcgcgctgagccgcgacgccttcatgcgcgag
atcgccgagatgacgcagcacatcgtcaagaaggccaaggaatacgaccgcgacaccgtg
ccgggcgactacgccacgctgtcgaccccatgccccaactgcggcggcgtggtgaaggaa
aactaccgccgctacagctgcaccggcaaggccgggcaggagccctgcggcttctcgttc
ggcaagtcgccggcggggcgcaccttcgaggtggccgaggcggaagtgctgctgcgcgac
aagcacatcggcccgctggagggcttccgctccaaggcgggctggcccttcacgtccgag
atcgtcctcaagtacgacgaagaggcgaagaactggaagctggaattcgacttcggcgac
gacaagaacgccgacaccggcgagatcgtcgatttcagcgagcaggacacggtgggcccg
tgcccgatctgcggcgcgccggtgttcgagcacggcagcaactacgtctgcgagaagtcg
gtgcccaccactgcgcagccgacgcccagctgcaccttcaagaccggcaagatcatcctg
cagcagccggtggagcgcgcgcagatggaaaagctgctggccacgggcaagaccgacctg
ctcgacaagttcgtgagcatgcgtacgcgccgcgccttcaaggccttcctgacctggaac
gccgaggagggcaaggtgaccttcgaattcgcgccgcgcgaaggcggcagcaagttcccg
ccgcgcaagaccttcggcaaggccgcgccggcgggcaagaccgcggcggccaagaaggtg
gcggccaagaagacgcccgccgccaagaaggcaccggccgcgaagaaggctgccgcgccg
cgcaagccgggcgcgggcctcaagcccagcgactcgctggccgcggtgatcggcgccgag
ccggtggcgcgcaccgaggtcatcaagaagctctgggactacatcaaggccaacggcctg
caggacgcggccaacaagcgcgcgatcaatgccgacgccaagctcaagccggtgttcggc
aaagaccaggtgacgatgttcgagctcgcgggcatcgtgggcaagcacctgtcggcgcca
tga
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