Vibrio aquimaris: FIV01_06820
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Entry
FIV01_06820 CDS
T06969
Symbol
gadB
Name
(GenBank) Glutamate decarboxylase beta
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
vaq
Vibrio aquimaris
Pathway
vaq00250
Alanine, aspartate and glutamate metabolism
vaq00410
beta-Alanine metabolism
vaq00430
Taurine and hypotaurine metabolism
vaq00650
Butanoate metabolism
vaq01100
Metabolic pathways
vaq01110
Biosynthesis of secondary metabolites
vaq01120
Microbial metabolism in diverse environments
vaq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
FIV01_06820 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FIV01_06820 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FIV01_06820 (gadB)
00430 Taurine and hypotaurine metabolism
FIV01_06820 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIV01_06820 (gadB)
Enzymes [BR:
vaq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
FIV01_06820 (gadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QFT26134
UniProt:
A0A5P9CIS7
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Position
1456460..1458190
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AA seq
576 aa
AA seq
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MGNINDIELQTASTPTYGRNLFREEVPTDKMPDIEHDPQAVYRFIRDELQLDGNPTLNMA
SFVTTVMDEEANQLIRDNLGKNYIDGEVYNRTLEIEQRCVRMLLDLFNAPHNMKTAQELA
DDKHIESGWGTVAIGSSEALMLCALSHKEQWKKKRKAQGKSFDKPNIVIGSDVHITWVKY
AQYFDVDIKWIPISEENNFVISANQVREVVDENTTCVVAVMGTSYTGQNDPVEAINDVLV
DIKNDSQKGWDVPLHVDGASGGFIEPFRDDNQVHRLNWDFKLEQVKTINVSGHKFGLVYP
GVGWALWKNFHEIPDKLFITTNVLGFDESTYSLNFSRGSAMVLAQYYNFLRLGKRGYGSV
VQNLMSLAQDLSNGLGSLRLTVTEHDKNAHGDAAKRVVFKDKPIFSVINNADYFPASVVR
LNLRYDGQDKPLTNDDIENYLYSVHDISDKLKQSNWVVPAFTMPLEKTPPIKDKNDNVIK
PANHDVPAIAVMRMVVKEGISRDMVSILIQNYADAVIKLEEQVRGIQNADKTYKASISFE
EEVACSATDLVEVACLKLKHIQKNPAKTSRVALGAK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacattaacgatattgaactgcagaccgcaagcacaccaacatatggccgaaac
ctttttcgtgaagaggtgccgacagataaaatgccggacattgaacatgatccgcaagca
gtgtatcgcttcatacgtgatgagcttcaattagacggtaatccaacgcttaacatggca
tcattcgtgactacagtgatggacgaagaagcaaatcagctcattcgtgataatttaggt
aaaaactacattgatggcgaagtgtacaaccgtactctagagatagagcaacgttgtgtt
aggatgctactggatcttttcaacgccccccataatatgaaaacggcgcaagaattggct
gatgacaaacatatagagagcggttggggaacggtagcaattggttcttctgaagctttg
atgctctgcgcactctctcataaagagcaatggaaaaagaaacgtaaagcccagggtaaa
agttttgataaaccaaacattgtcattggctctgatgttcatatcacctgggtcaagtac
gctcaatattttgatgttgacattaaatggattccaattagtgaagaaaacaacttcgtt
atctcagcgaatcaagtaagagaagttgtggatgagaatacgacttgtgttgtcgctgtt
atggggacatcttacactgggcagaatgatcctgtcgaagcaattaatgatgtgctggtc
gatataaagaatgattctcaaaaaggctgggatgtgccactccatgtcgatggtgccagc
ggtggttttattgaacccttccgtgatgacaatcaagtacacagactaaactgggatttc
aagttagagcaagtgaaaaccatcaatgtgtccggtcataaatttggtttagtgtaccct
ggagtgggctgggcattatggaaaaactttcatgaaattccagataaattgtttattaca
acgaatgttcttggctttgatgagtctacctatagccttaacttctcgcggggcagcgca
atggttctggctcagtactataactttttacgattaggcaaaagaggttatggctcggta
gtacaaaacctgatgtcgttagcacaagacttgtctaatgggttaggctctttgcgctta
acggtaacggagcatgataaaaatgctcacggtgatgctgcgaaaagagttgtgtttaag
gacaaaccaatattttcagtcatcaacaatgccgactattttccagcatctgttgtaagg
cttaatctcagatatgatggtcaggataaacctttaactaatgatgatattgaaaactat
ttgtactctgttcacgacatatcagacaagctcaagcaatccaattgggtagtacctgct
ttcactatgccgcttgaaaaaacgccacctatcaaagataaaaatgataatgttattaag
cctgcaaatcacgatgtgccagccattgcggtgatgcgtatggtagtgaaagaaggcatc
agtagagatatggtcagtatattgattcaaaactatgccgatgcagtgatcaagcttgaa
gaacaagtgcgtggtattcaaaatgctgataagacctataaagcaagtatttcttttgag
gaggaagtggcttgtagtgcaaccgatttagttgaagttgcttgcttgaagctaaagcat
attcagaaaaatccagcaaaaacatcaagagtggctcttggagcgaaataa
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