KEGG   Vigna angularis (adzuki bean): 108319954
Entry
108319954         CDS       T04660                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03082  ATP-dependent chromatin remodeling
var03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108319954
   03083 Polycomb repressive complex
    108319954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:var03036]
    108319954
Enzymes [BR:var01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108319954
Chromosome and associated proteins [BR:var03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     108319954
   HDAC complexes
    Sin3A-HDAC complex
     108319954
    BRAF-HDAC complex
     108319954
    REST complex
     108319954
    SHIP complex
     108319954
    MiDAC complex
     108319954
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     108319954
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108319954
  Chromatin remodeling factors
   NuRD complex
    108319954
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 108319954
NCBI-ProteinID: XP_017406761
UniProt: A0A8T0JHH0
LinkDB
Position
Un
AA seq 496 aa
MESGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VLKPTAAKDRDLCKFHADDYVAFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGALKLNHGVCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKIHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDTGYGKGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETSVALGIELDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRHLLDEIRAKLLDNLSRLQHAPSVPFQERPPDSELQERDENQDDRDERWDPDSDMEV
DDDSKPRRRVKSERVEAEHKDAESYHKHLDCGRDFLTPFKEIACSKVSAGDSMAVDEPCI
KEEQDNLKELSDHRSR
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggaaagtggagggaactcccttccgtcagggccagatggtgtgaagagaaaggtttca
tatttctatgatccagaggttggaaactattattatgggcaggggcacccaatgaaacca
catagaattcgaatgacgcatgctcttttagcccactatggattgcttcaacacatgcag
gttctgaagcctactgctgccaaagatagggacctctgcaagttccatgctgatgattat
gtggcctttttgagaggcatcacccctgaaacacagcaagatcaattaagacaattgaag
agatttaatgttggtgaagactgccctgtatttgatggtctttactctttctgccagaca
tatgcaggaggctctgttggtggtgctctaaaattgaaccatggagtatgcgatattgca
ataaattgggctggtggtctgcatcatgcaaagaagtgtgaggcttctgggttttgctat
gttaatgacattgtgctggctattttggaacttctcaaaatacatgagcgtgttctatac
gtggacattgatatccatcatggtgatggtgtagaggaggccttttacaccactgatagg
gtcatgactgtttcatttcacaagttcggggattactttcctggaacaggtgatattcgt
gatactggatatggtaaagggaaatattattcacttaatgttcccttggatgatggaatc
gatgatgagagctatcagtccttgtttaagccaataatgggaaaggttatggaaattttt
aggcctggtgctgttgtattacaatgtggtgctgactctttatctggagacagattaggt
tgtttcaatctttccataaaagggcatgctgagtgtgtcagatatatgagatcttttaat
gttccccttctattgcttgggggaggtggctatacaataagaaatgtggcacgctgctgg
tgttacgagactagcgttgctcttgggattgaactagatgataagatgcctcaacacgag
tattatgaatattttggtcctgattacactcttcatgttgctccaagtaacatggaaaac
aagaactctcgacatttattggatgaaataagagcaaaacttcttgataatttatctagg
cttcaacatgcaccaagtgtcccattccaggagcgaccacctgattcagagctacaagag
agagatgagaatcaagatgatagagatgaaagatgggatccagattctgatatggaggtt
gatgatgacagcaaacctcgcagaagggtgaaaagtgaacgtgttgaagctgagcataaa
gatgcagaaagttatcataaacatctggactgtggaagagattttctcacgcctttcaag
gagattgcatgctccaaggtgtcggcgggggactcaatggcagtggatgaaccatgcatc
aaagaggagcaggataatttaaaagagctttctgatcacaggtcaagatga

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