Vigna angularis (adzuki bean): 108319954
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Entry
108319954 CDS
T04660
Name
(RefSeq) histone deacetylase 19-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03082
ATP-dependent chromatin remodeling
var03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108319954
03083 Polycomb repressive complex
108319954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108319954
Enzymes [BR:
var01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108319954
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
108319954
HDAC complexes
Sin3A-HDAC complex
108319954
BRAF-HDAC complex
108319954
REST complex
108319954
SHIP complex
108319954
MiDAC complex
108319954
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108319954
Heterochromatin formation proteins
Other heterochromatin formation proteins
108319954
Chromatin remodeling factors
NuRD complex
108319954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
108319954
NCBI-ProteinID:
XP_017406761
UniProt:
A0A8T0JHH0
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Position
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AA seq
496 aa
AA seq
DB search
MESGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VLKPTAAKDRDLCKFHADDYVAFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGALKLNHGVCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKIHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDTGYGKGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETSVALGIELDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRHLLDEIRAKLLDNLSRLQHAPSVPFQERPPDSELQERDENQDDRDERWDPDSDMEV
DDDSKPRRRVKSERVEAEHKDAESYHKHLDCGRDFLTPFKEIACSKVSAGDSMAVDEPCI
KEEQDNLKELSDHRSR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtggagggaactcccttccgtcagggccagatggtgtgaagagaaaggtttca
tatttctatgatccagaggttggaaactattattatgggcaggggcacccaatgaaacca
catagaattcgaatgacgcatgctcttttagcccactatggattgcttcaacacatgcag
gttctgaagcctactgctgccaaagatagggacctctgcaagttccatgctgatgattat
gtggcctttttgagaggcatcacccctgaaacacagcaagatcaattaagacaattgaag
agatttaatgttggtgaagactgccctgtatttgatggtctttactctttctgccagaca
tatgcaggaggctctgttggtggtgctctaaaattgaaccatggagtatgcgatattgca
ataaattgggctggtggtctgcatcatgcaaagaagtgtgaggcttctgggttttgctat
gttaatgacattgtgctggctattttggaacttctcaaaatacatgagcgtgttctatac
gtggacattgatatccatcatggtgatggtgtagaggaggccttttacaccactgatagg
gtcatgactgtttcatttcacaagttcggggattactttcctggaacaggtgatattcgt
gatactggatatggtaaagggaaatattattcacttaatgttcccttggatgatggaatc
gatgatgagagctatcagtccttgtttaagccaataatgggaaaggttatggaaattttt
aggcctggtgctgttgtattacaatgtggtgctgactctttatctggagacagattaggt
tgtttcaatctttccataaaagggcatgctgagtgtgtcagatatatgagatcttttaat
gttccccttctattgcttgggggaggtggctatacaataagaaatgtggcacgctgctgg
tgttacgagactagcgttgctcttgggattgaactagatgataagatgcctcaacacgag
tattatgaatattttggtcctgattacactcttcatgttgctccaagtaacatggaaaac
aagaactctcgacatttattggatgaaataagagcaaaacttcttgataatttatctagg
cttcaacatgcaccaagtgtcccattccaggagcgaccacctgattcagagctacaagag
agagatgagaatcaagatgatagagatgaaagatgggatccagattctgatatggaggtt
gatgatgacagcaaacctcgcagaagggtgaaaagtgaacgtgttgaagctgagcataaa
gatgcagaaagttatcataaacatctggactgtggaagagattttctcacgcctttcaag
gagattgcatgctccaaggtgtcggcgggggactcaatggcagtggatgaaccatgcatc
aaagaggagcaggataatttaaaagagctttctgatcacaggtcaagatga
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