Vigna angularis (adzuki bean): 108320881
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Entry
108320881 CDS
T04660
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108320881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108320881
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108320881
Spliceosome [BR:
var03041
]
Complex A
U2 snRNP components
U2 related factors
108320881
Complex B
108320881
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FeoA
Motif
Other DBs
NCBI-GeneID:
108320881
NCBI-ProteinID:
XP_017407948
UniProt:
A0A8T0JHW2
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Position
Un
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AA seq
1131 aa
AA seq
DB search
MDEGKHKSRKEIHELKDGDSKRSHRDRDRDRDRTGERGKDKNDGRHRDREKRDRESRRHE
RERSTDSEDKHDRDREKRKDKDKDVDRERGREKKRERDRDRDDRERTDRVREKEKEREKK
EDKERIRERERRDHEREKEKERERVRRAREREKRREVDSDYSDGESRERDRKRHKKEDGD
YKKRERERSVSKPIRQSEEREGSPRKKSVGDDSDTKDGEKKPTREEEMENEQKRLDEEME
KRRRRVQEWQELRRKKEEAEREKHGEVSTNEPESGKTWTLEGESDDEEGPGTEKHDTGMD
VDEDVEPADTEPKDVTVVDTDNGTIASDLQEGTVGTPEDEEIDPLDAFMNSMVLPEVEKL
NNAVTSVVSDKAIDIKAKDKGNEQSRGAQSRKGSNKSIGRIIPGEESDSDYADDEVERDP
LDEDDDEFMKRVKKTKAEKLSLVDHSKIDYEPFKKTFYIEVKEISKITPEEAAAYRKQLE
LKIHGKDVPKPIRSWHQTGLASKILETIKKMNFDKPMPIQAQALPVIMSGRDCIGIAKTG
SGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFAKVLGLRCVPV
YGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGF
EPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDILQLVEV
RPDNERFLRLLELLGEWYEKGKILIFVHSQEKCDSLFKDLLRHGYPCLSLHGAKDQTDRE
STISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCA
ITFISEEEARYAPDLLKALELSEQTVPNDLKTLADSFMVKVNQGLEQAHGTGYGGSGFKF
NEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDEGIRKAGGDISQHPALAQILAATKVNAP
ALPTPISAAQLISNGGLPVSFPSVLGLQTPTVLPGTGLPLAANDGAARAALAAMNLHRNI
EKIQSEALPEHYEAELEINDFPQNARWKVTHKETLGPISDWTGAAITTRGQFFPPGKIPG
PGERKLYLFIEGPTEQSVKTAKAQLKRVLEDITNQALQLPGGNQPGKYSVV
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggatgagggaaagcataaatcgaggaaagaaattcacgagttgaaggatggagattct
aagaggagtcaccgcgaccgtgaccgtgaccgtgatagaactggagaaaggggtaaggat
aaaaacgatgggaggcacagggatagggagaagagggatcgtgagtcccgaagacatgaa
agagagaggagtactgattctgaagacaagcatgatagagacagggagaaacgaaaagat
aaagataaggatgtggatagggaaagaggtcgagagaagaaaagggaaagggacagggac
agggatgacagggagaggacagacagagtaagggaaaaggagaaagagagggaaaaaaaa
gaggataaggagaggatccgagagagggaaaggagggatcatgagagagagaaagaaaag
gaaagagaaagggtgaggagagcacgagagagggagaagcgtagagaagttgatagtgat
tacagtgatggtgaatctagggagagggatagaaagcggcacaagaaagaagatggtgat
tacaagaagagggagagggaaaggagtgtcagcaagccaatcaggcaatccgaggaacgt
gaagggagcccaagaaaaaagagtgtcggagatgattcagataccaaagatggagagaaa
aaacctacccgtgaagaggagatggaaaatgaacaaaagaggttggatgaagaaatggaa
aagcggaggaggagagttcaagagtggcaagagctaagaaggaagaaagaggaagcagaa
agagaaaagcatggcgaagtaagtactaatgaacctgagtctggaaagacctggacacta
gaaggggaatccgatgatgaagaaggaccgggtactgagaagcatgatacaggtatggat
gtagatgaagatgtcgaacctgctgatacggaacctaaagatgtgacggtggtagacact
gataatgggacaattgcatctgatctacaggagggaactgttggtacacctgaagatgag
gaaatagatccattggatgctttcatgaattctatggttctacctgaagttgaaaagctg
aacaatgctgtgacatcagtagtttctgataaagccattgacataaaagccaaagataaa
gggaatgagcaaagtcgaggtgcacagtcgaggaaaggttcaaataagtctattggcaga
ataattcctggtgaagagtctgactcagattatgctgatgatgaagttgagagggatcca
ttggatgaagatgatgacgagttcatgaaaagagtgaagaaaacaaaagctgagaagctt
tctttagttgaccattcaaagattgactatgaaccattcaagaaaactttttatattgag
gtgaaggagatctcgaagattactccagaagaagctgcagcatacaggaagcagttggaa
ttgaagatacatggaaaggatgtgccaaagccaataagatcatggcaccagactggcctt
gctagcaaaattttggagacaataaagaagatgaactttgacaagcctatgcctattcaa
gctcaggcactccctgtaatcatgagcggtcgagattgcatagggattgctaaaactggg
tcaggcaaaacacttgcatttgttctgccaatgctgaggcatatcaaggatcagccacca
gttgttgccggagatggacctattgggcttattatggcccctacaagggaacttgttcaa
cagattcacagtgatataaaaaaatttgcgaaggtgctaggtctcaggtgtgtgcctgtg
tatggaggctctggtgttgctcaacaaattagtgagttgaaacgaggtgctgagatagtt
gtttgtacgccaggtaggatgattgacatattatgcaccagtagtggaaaaataactaac
ttgcgtagagtcacttatctggtcatggatgaggctgatcgaatgttcgacatgggcttt
gaacctcaaattacacgaattgttcagaatattcgtccagatcgtcaaacagttcttttc
tctgctacattcccccgtcaggttgaaattctggctcgtaaggttttgaataaacctgtt
gaaatacaagttggcgggaggagtgtagtgaacaaagacatattacagttagttgaggtg
agaccagataatgaaaggttccttagactcttagaattattaggggaatggtacgagaaa
gggaagatcctgatatttgttcactcccaggagaaatgtgatagtctgttcaaggatctg
ctcaggcatggttatccatgcctttctcttcatggggctaaggaccagacagaccgagaa
tccacaatatctgactttaaaagcaatgtctgcaatttgttggttgcaacaagtattgct
gccaggggattagatgttaaggagctagaattggtgatcaattttgatgttcctaaccac
tatgaagattatgtacaccgtgttgggcgcactggacgagctggccgcaagggttgtgcc
attacatttatatctgaggaagaggcaagatatgcacctgatctgttgaaagccttggaa
ttatctgagcagactgttcccaatgatctgaaaactcttgctgatagctttatggtaaag
gtgaaccaaggactggagcaagcccatgggactggttatggaggaagtggctttaaattt
aatgaagaggaagatgaggtaaggagagcagcaaagaaagcacaagccaaggaatatggg
tttgaagaagacaagtcagattctgaagatgaagatgaaggtattcggaaggcaggaggt
gatatctcacagcatcctgctcttgcacagattcttgccgcgactaaagttaatgctcct
gcattgcctactcccatctctgctgctcagctgatttcgaatggtggactacctgtttct
tttccgtctgttcttggtctccagaccccaacagtcttgcctgggactgggctacccctt
gctgcaaatgatggggcagctcgagcagcactagctgcgatgaacctgcatcgcaacata
gaaaaaatacagtcagaagcattaccggagcattatgaggctgagttggaaataaatgat
ttcccccagaatgctcgctggaaagttactcataaggaaacattaggtcccatatctgat
tggacaggagctgccattaccaccagggggcagttcttcccacctggaaagatcccagga
cctggagaacgcaaactctacttgttcattgaaggtcctactgagcagtctgttaagaca
gctaaagcacaattgaaacgtgttttggaagacatcacaaatcaggctttgcaacttcct
ggtggaaatcaaccgggcaaatactctgttgtgtaa
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