Vigna angularis (adzuki bean): 108321295
Help
Entry
108321295 CDS
T04660
Name
(RefSeq) vacuolar protein sorting-associated protein 35A
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04142
Lysosome biogenesis
var04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
var00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108321295
04142 Lysosome biogenesis
108321295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
var04131
]
108321295
Membrane trafficking [BR:
var04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Retromer subcomplex
108321295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
VPS35L_N
HBS1_N
RME-8_2nd
Motif
Other DBs
NCBI-GeneID:
108321295
NCBI-ProteinID:
XP_017408491
LinkDB
All DBs
Position
10:complement(7982000..7993035)
Genome browser
AA seq
794 aa
AA seq
DB search
MMLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVADAVEFVL
QNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDAVLP
RVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQASVDIKTVLSQLME
RLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQPDMPTVGVVTLYSSLLTFTLHVHP
DRLDYADQVLGACVKKLSGKGKIEDNKATKQIVALLSAPLEKYNDVMTALKLSNYPRVME
YLDIPTTKVMATVIIQSIMKNGTHISTSEKVDALFGLIKGLIKDSDGVPKDELDEDDFKE
EQNSVARLIQMLYNEDQEEMFKIIDTVRKHILTGGPTRLPFTVPPLVFSSLKLVRQLQGQ
EENPFGDDASVTPKKIFQLLNQTIETLSGVLAPELALQLYLQCAEAANDCDLEPVAYEFF
TQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMSNAARGNTGSVMLFIEILN
KYLYFFEKGNLQVTVAAIQGLIELIMNEMQSDTTTSDPAADAFLASTMRYIEFQKQKGGT
VGEKYEALKVSHAG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatgttagatggaaccgaagatgaagagaagtttctcgctgccggaatcgccggtctt
cagcagaactccttctacatgcaccgtgcactggattccaacaatctccgagacgctttg
aagtattcggctcagatgctctccgagctcaggacttccaagctttctcctcacaagtac
tacgaactatatatgcgcgcctttgatcagttacggaaacttgagatgttcttcgaggaa
gagactcgtcgcggttgttccattattgatctttatgaactcgtccagcatgccggaaac
attttgccgcgattgtatctcctctgtacagtaggatcagtatacatcaagtccaaggaa
gctcctgcaaaggatgttctcaaggatcttgtggagatgtgtcgtggtattcaacaccct
gttcgtggactctttctaaggagttacctttctcaagttagtagggataaattgccagat
attggttcagagtacgaaggggatgcggatactgtagcggatgctgtagaatttgtactt
caaaatttcactgaaatgaacaaactttgggtgcggatgcaacatcaggggcctgcccgg
gagaaggagaaacgagaaaaggaaaggagcgagttgcgtgatcttgttgggaagaatctt
catgttctcagtcagattgagggtgttgacctagatatgtacaaagatgccgtgcttccc
agagtactggagcaggttgtgaattgcaaagatgaattggctcagttctacttgatggat
tgcataattcaagtcttccctgatgagtatcacttgcaaactcttgatgtgttattgggt
gcttaccctcaacttcaggcgtcagttgatatcaagacagtgctgtctcagttgatggag
aggctttcaaattatgcagcttcaagtgcagaggtgttgccagagtttttgcaagttgaa
gcattttcgaaattgagcaatgccattggcaaggtaatagaggcacaacctgacatgccc
actgttggagttgtaactttgtattcatcacttctcaccttcacgcttcatgttcaccct
gatcgccttgattatgcagatcaagtcttgggagcatgtgtgaaaaaactatctggcaaa
gggaaaattgaggacaacaaggcaactaagcagattgttgctctgttaagtgctccacta
gagaaatataacgatgttatgactgcattgaagctttcaaattatcctcgtgtaatggaa
taccttgatattccaactactaaggtcatggcaactgttattattcaaagcattatgaaa
aatggaacacacatttctacatcagaaaaggttgatgcattgtttggactgataaagggg
ctcatcaaggattctgacggggttcctaaagatgagcttgatgaagacgatttcaaagag
gagcagaattctgttgcccgccttatccaaatgctttataatgaggatcaagaagaaatg
tttaagatcattgatactgtgaggaagcacatactgactggaggaccaacacgtctgcct
ttcactgttccacctcttgttttttcttctttaaagttggtcaggcagttgcaaggtcaa
gaagaaaatccttttggagatgatgcctcagtaacaccaaagaaaatctttcagctttta
aatcagaccatcgagaccttgtcaggtgttctggcaccagaattagcactgcagttgtac
ttgcaatgtgctgaggctgcaaatgactgtgatttggaacctgttgcttatgaatttttt
acccaagcttatattctatacgaagaagaaatttctgattccagagcacaggtcacggct
atccatttaataataggaactcttcaaaggatgcatgtctttggtgttgaaaacagggat
actttaactcacaaggccacagggtattctgcaaagcttttaaagaagccagatcaatgc
agagctgtatatgcatgctcacatctgttttgggttgatgatcatgataacatgaaagat
ggagagagggtcctattatgtcttaaacgggctttacgaattgcaaatgctgcccaacaa
atgtcaaatgcagctcgaggtaacacgggatcagtaatgctcttcatcgagatattaaac
aagtatctttacttctttgagaagggaaacctacaagtcaccgttgctgctatacagggc
ctaatcgagttaattatgaacgaaatgcagagtgataccacgacttcagatccagctgcc
gatgctttcttagccagtactatgcgatatatagagttccagaaacaaaaaggtggtacc
gtaggcgagaagtatgaagccctcaaggtttcacacgctggatga
DBGET
integrated database retrieval system
