Vigna angularis (adzuki bean): 108322089
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Entry
108322089 CDS
T04660
Name
(RefSeq) autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
var00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108322089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
var04131
]
108322089
03029 Mitochondrial biogenesis [BR:
var03029
]
108322089
Membrane trafficking [BR:
var04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
108322089
Others
Rab GTPases of specific organelles
Auto phagosome
108322089
Mitochondrial biogenesis [BR:
var03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108322089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ATG16
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
WDR54
PQQ_2
Phage_GP20
Cytochrom_D1
Cep57_CLD_2
pAdhesive_6
Mod_r
V_ATPase_I
Phlebovirus_NSM
Motif
Other DBs
NCBI-GeneID:
108322089
NCBI-ProteinID:
XP_017409555
LinkDB
All DBs
Position
1:complement(31100972..31104265)
Genome browser
AA seq
553 aa
AA seq
DB search
MYCETQDFDGRDLGKRPLSWDAICRNPKGLCLNSVFVLVMAKTNKSQEEIACEAIKHALK
ALRKRHLLEEAAHGPAVLALSRPFVSQGSEWKEKAENLQVELQHCYKAQSRLSEQLVVEV
AESRASKALVQEKEIAVADLQKELTELRDECSQLKEDLEEKFKSLEVLVSENTELKAQLE
QMTTKANKAEAENKMLIDRWMLEKMKDAERLNEANALYEDMVEKLKASGLEQLARQQVDG
IVRQSEEGAEFFLESNIPSTCKYRLRAHEGGCASMLFEYNSSKLITGGQDRLVKMWDTNT
GSLSSTLHGCLGSVLDLTITHDNRSVIAASSSNNLYVWDVHSGRVRHTLTGHTDKVCTVD
VSKISSRHVVSAAYDRTIKVWDLVKGYCTNTIIFHSNCNALSFSMDGQTIFSGHADGNLR
LWAIQSGKLLSEVAAHTSAVTSISLSRNGNFVLTSGRDNLHNLFDVRSLEVCSTLKAAGN
RVASNWSRSCFSPDDNHVAAGSADGSVYIWSISKGDIVGTLKEHTSSVLCCTWSGIRKPL
ASADKNGVVCVWT
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtgagacccaagattttgatggtagggatttgggtaaacgccctttgtcgtgg
gacgctatttgcaggaacccaaaaggtttatgcttgaattctgtttttgtgctagtaatg
gcgaaaacaaacaagtcgcaagaagaaattgcgtgtgaagctattaaacacgctttgaag
gcactgcggaagcgccatttgcttgaagaagccgctcatggtcccgctgttctagctctt
tctagaccctttgtttctcagggctctgaatggaaagagaaagcagagaatcttcaagtg
gaacttcagcattgctacaaagctcaatctcggctgtctgagcaacttgttgtggaagta
gctgagtccagagcttcaaaagcgttggttcaagagaaagaaattgcagttgctgatttg
caaaaggaattgaccgaattgagggatgagtgctctcaattaaaggaagacttggaagaa
aagtttaaatctctagaagtgcttgttagtgagaatactgaacttaaagcccaactggag
cagatgactactaaagcaaataaagctgaagctgagaataagatgttgattgaccgctgg
atgttggaaaagatgaaggatgctgaacgcctaaacgaggctaatgcactatacgaagac
atggtcgagaaactaaaggccagtggcttagagcaacttgcaaggcagcaggtggatggc
atagttcgccaaagtgaagaaggtgctgagttttttttagagtcaaacattccttccaca
tgtaaatacaggcttcgtgcacatgaaggtggttgtgcttccatgttgtttgagtacaat
tccagtaaattgattactgggggacaggatcgcttagttaaaatgtgggatacaaatacc
ggatccttatcttctacacttcatggctgccttggctcagtattagatctcactatcacc
catgataatcgatctgtcattgctgcaagcagctcgaacaacttgtatgtatgggatgtc
cactcaggccgtgtccgtcatacccttactggccacacagataaagtttgtactgttgat
gtgagcaagatttcaagtcgtcatgttgtcagtgctgcttatgaccgtaccataaaagtt
tgggacctagtgaaaggttactgcactaacacaatcatttttcacagcaactgcaatgct
ctctccttcagcatggatggtcagaccatattttcaggacatgctgatggtaatcttcgg
ttatgggccattcagagcggaaagctactcagcgaggttgctgcacatacatctgcagtt
acatcaatatccctttctcgaaatggaaattttgtactgaccagtggaagggacaatttg
cataatttgtttgacgtgcgatctcttgaagtttgtagcacactaaaagcggcaggaaac
agagttgcttctaactggagccgctcctgttttagtccagatgacaatcacgttgctgct
gggtctgccgatggatctgtgtatatttggtcaatttctaaaggtgatatagtcggtacg
ctcaaggaacatacttcttctgttctatgttgtacgtggagcgggatcagaaaaccccta
gcttcagctgacaagaatggggtagtttgtgtctggacataa
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integrated database retrieval system
