Vigna angularis (adzuki bean): 108322257
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Entry
108322257 CDS
T04660
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
var00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108322257
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
var01002
]
108322257
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
var04131
]
108322257
04121 Ubiquitin system [BR:
var04121
]
108322257
Enzymes [BR:
var01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108322257
Peptidases and inhibitors [BR:
var01002
]
Metallo peptidases
Family M67
108322257
Membrane trafficking [BR:
var04131
]
Endosome - Lysosome transport
Others
Others
108322257
Ubiquitin system [BR:
var04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
108322257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
108322257
NCBI-ProteinID:
XP_017409772
UniProt:
A0A8T0L396
LinkDB
All DBs
Position
1:38741423..38749144
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AA seq
511 aa
AA seq
DB search
MTIDLDSIARKIDVDNSIPLRYYYRIADNLLKQASIYREENNVVDLYIILVRFLSLVSET
IPYHRDYHASLPNERAAYKKRSRPVLDELESLKPEFKRRVEKLKDLPVKASLPKENGYNK
ALQSSVNSSLEWPVVNKSNNLSVDFKQPSGFGSHSSWNYNSMSSSDSMPIDKQFQKLSLS
LPAPNKETLSRHSFLGPNGLRGQWLGPSAEIKVQYPSSDLAHMIDSSLNPTGLYDIVAIK
DVDQGPATSTMDAVLSLDDGRWLHPSVESGSSVVTESREDPLQSLNIKQPLPPPVLAQVH
PECAHIPPSKVADPRPGPAKSSHDSELGPTTYQHLHIPVKMMEDFLRLASQNTRKNLETC
GVLAGSLKNRVFHITTLIIPKQESTSDSCSTLNEEEIFEVQDSLSLFPLGWIHTHPSQTC
FMSSVDLHTHYSYQIMLPEAIAIVMAPTDTTSPHGIFHLSDPGGVSVIRNCQQRGFHPHE
EPSDGSPIYEHCSHVYMNANLRFDVVDLRER
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgacttagattccatcgctcgtaaaatcgacgttgataatagcattcccctc
cgctactactatcggattgccgataacctcctcaagcaggcaagtatctacagggaggag
aataacgtagttgacttgtacattatactcgttagatttttaagtttggtttctgaaact
ataccgtatcatcgagattatcatgcttcgctgcccaatgaaagagcagcttataagaag
agatcacgacctgtattggatgagcttgaatctttgaagcccgagtttaaacgccgggtg
gaaaaattaaaagacttgcctgtaaaagcttcattgcccaaggaaaatggctacaataag
gctttacagagttctgtaaattcatctttggagtggccggttgtcaataaaagtaataac
ttgagtgtggattttaaacagccttctggtttcggttcacactcttcatggaattataat
agtatgtcatcatcagattccatgcctattgataagcagtttcagaaactatctcttagt
ctacctgctccaaataaggagactttgtccagacactcatttttaggaccaaatggcctt
cggggccaatggcttggacctagtgcagaaataaaggttcaatatccaagcagtgatctc
gcacacatgattgattcaagcctgaatccaactgggctgtatgacattgtggcaattaaa
gatgtcgatcaaggaccagctacatccaccatggacgcagttctctccttggatgatgga
agatggttgcatccttctgttgagtctggttcttctgtcgtaacagaatcaagggaagac
cccttacaatcgctcaacatcaagcaacctttgccacctcctgttcttgcacaggtgcac
ccagaatgtgcccatattcctccttcaaaagttgcagatccaagaccgggacctgctaaa
tcttctcatgattctgaacttggtccaacaacatatcaacacctacatattcctgtcaaa
atgatggaagattttttgagattagcttcacagaacacacggaagaacttagagacgtgt
ggtgttcttgcagggtccttgaaaaacagggtatttcatatcacgacacttataatccca
aagcaggaatcgacctcagactcgtgttcaactttgaacgaagaagaaatatttgaagtt
caagacagcttatcactctttcctttaggttggatacatacacatccatcacaaacttgt
ttcatgtcttcagtggatctacacactcattactcataccagatcatgttaccagaggca
attgctattgtcatggcccctacagatactactagtccacatggcatatttcatctatct
gatccaggtggtgtttctgtaattcgtaactgtcaacaacgtggatttcatccccacgaa
gagccttcggatggaagtccaatatatgagcactgctctcatgtctatatgaacgctaac
ttgaggttcgatgttgttgaccttcgagagcgatga
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