Vigna angularis (adzuki bean): 108326815
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Entry
108326815 CDS
T04660
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
var04131
]
108326815
04121 Ubiquitin system [BR:
var04121
]
108326815
Enzymes [BR:
var01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108326815
Membrane trafficking [BR:
var04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108326815
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108326815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
zinc_ribbon_9
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-HC5HC2H_2
Vps39_2
Rad50_zn_hook
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
108326815
NCBI-ProteinID:
XP_017415877
UniProt:
A0A0L9U8T3
LinkDB
All DBs
Position
3:35647830..35649757
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AA seq
386 aa
AA seq
DB search
MMSSGTSSYWCYRCSRFVRVFRQDAVVCPDCDGGFIEEIEHPPRSVLLDPRRRRFPAAAM
YMIGQRPASDNAARPFLRRTRRNGGDRSPFNPVIVLRGSAAATSATSEEESRGFELFYDD
GAGSGLSPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTIEIDN
THLTMESHCAVCKEAFELGTAVREMPCKHIYHPECILPWLALHNSCPVCRHELPADSSNA
NSNANSNPPQNVGLNEEENVGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFN
NGGEPRRISWSSRGNRGRESGGLNRFFRNLFGCFRGGVGSSGSSTTQRSASSRESMRASS
SRSSMDPSPRSRRTWSMDVNSGMRAW
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttctgggacatcctcgtactggtgctaccggtgcagccgattcgtccgcgtt
tttcgccaggatgccgtggtctgtcccgactgcgacggcggattcatcgaagaaatcgaa
cacccgccgcgctcagtcctcctcgaccctcgccgtcgtcgcttccctgctgccgccatg
tacatgatcggccagcgccctgcctccgacaacgctgcccgtcccttcctgcgccgcacc
cgccgcaacggtggtgaccgctcccccttcaaccccgttatcgtcctccgcggcagcgca
gctgccacctccgctaccagcgaggaggaaagtcgaggctttgagctcttctacgacgat
ggtgccggttctggcctgagtcccttgcctccgagcatgtcagagtttctactcggatct
ggattcgataggcttctggagcaactgtctcagattgagatcaacggtattggaaggtat
gagcaccctcctgcgtcaaaagcagccatagattccttaccaaccatcgaaattgataac
actcacttaaccatggaatcacactgtgcggtgtgcaaagaagcttttgaattaggtacc
gcggtgagggaaatgccgtgtaagcatatatatcaccctgaatgcatcttaccatggctc
gctctccacaattcttgtcctgtttgtcgccacgagttacctgcggattcctcaaacgca
aattcaaatgcaaattcaaatccaccacaaaatgttggcttgaacgaggaagagaatgtg
gggttgacgatttggaggttgcccggtggagggtttgctgttgggagattttccggtggg
agaagaggtgctgagagggagcttcctgtggtttatactgaaatggatggagggtttaac
aatggaggtgagcctaggaggatttcatggtcttctagagggaacagagggagagagagt
gggggattgaacaggtttttccgcaatttgtttggttgcttcagaggtggggttggaagt
agtggttctagtactacacagcgttctgcttctagtagagagtctatgagagcgagttca
tctcgttctagtatggatccttctccgcgatcgcgtaggacttggtctatggatgtaaac
agtgggatgagagcatggtag
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