KEGG   Vigna angularis (adzuki bean): 108328481
Entry
108328481         CDS       T04660                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1b
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    108328481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:var04121]
    108328481
   03036 Chromosome and associated proteins [BR:var03036]
    108328481
Enzymes [BR:var01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108328481
Ubiquitin system [BR:var04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108328481
Chromosome and associated proteins [BR:var03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     108328481
    Noncanonical PRC1 (PRC1.1)
     108328481
    Noncanonical PRC1 (PRC1.3/1.5)
     108328481
    Noncanonical PRC1 (PRC1.6)
     108328481
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-RING_6 zf-UDP zf-C3HC4_5 zf-RING_11 zf-rbx1 zf-C3HC4_4 zf-Nse zf-RING_4
Other DBs
NCBI-GeneID: 108328481
NCBI-ProteinID: XP_017417843
LinkDB
Position
3:17484463..17493941
AA seq 404 aa
MKNKRNKQNLRRNAPKGLTSQLGIEDDDEVLYPLDLADLRKDVECPICLGIIRNTRMVME
CMHRFCKECIEKSFRLGNNECPACRTHCSSRRSLREDIVFDEVIAVVFPNIDEYEKKEIA
FSDDAKNNIKSMQEAYGQTLERQNEALRKKAAAAAASGSKDKYSRSGTQTLRRSARNESA
FSESSSSRDMTLPPIAEERETQVIPVRDFADLQIQPQSSQHETNARTVAGGTIQSLIASS
DKLVWGRFGPRSHTNSNARHAAALRSNRLERFIDHLQNSNQNDDELDIYIKLVSFEEERV
TNLARPYLNCRPTLSIDQLCQYVAIETLLQTEEIELYVVKGCEPGFVSGREKFVADKYET
QFLERGDKTLAEIIPNNLSLGHLVLAYKRKKWNLNEVLSCSGSE
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgaaaaataagagaaacaagcaaaatcttcgtcgaaatgcacccaaaggtcttacaagt
caattagggattgaagacgatgatgaagtgttgtatcctttagacctggcagacctacga
aaggatgtcgaatgcccaatttgccttgggatcattcgaaatacaagaatggtcatggaa
tgcatgcatcgcttttgcaaggagtgcatagagaaatcctttcgcctcggtaacaatgaa
tgccctgcttgtcgtactcattgttcaagccgaagatcgctaagggaagacatcgtcttt
gatgaagtgattgctgtcgtttttccaaacattgatgaatacgagaaaaaggaaatagct
ttttcggatgatgcaaagaataatataaagtcaatgcaagaagcgtatggccagactctt
gaacgacaaaatgaggcactgagaaagaaggctgctgctgctgcagcttctgggtcaaaa
gataaatactcaaggagtggaactcagacactgagaagaagtgcaagaaatgaaagtgca
ttttcagaatctagttctagcagggacatgacattgcctcctattgctgaagagagagag
acacaagtcatacctgtcagagactttgctgatttacagatacagccacaaagctctcag
catgagactaatgcaagaacagttgcaggtggaacaattcaaagtctcattgcctcatct
gataaacttgtatgggggcgatttggccccaggagtcacaccaacagcaatgctaggcat
gccgctgctttgaggagcaatcgcttggagagattcattgatcatctgcaaaactccaat
caaaatgatgatgagctggacatctatatcaaacttgtctcttttgaggaagaaagagtg
acaaatttggcaaggccataccttaactgcagacctactctctcaatcgaccaactttgc
cagtatgttgccattgaaaccttgctgcaaactgaagaaattgaattgtacgtggtgaag
gggtgtgaacctggctttgtaagcggtcgtgaaaaatttgttgcagacaaatatgagact
caatttcttgagagaggggataaaactttggctgaaatcataccaaacaatctcagcctt
ggccatctggtcttagcttacaagaggaagaagtggaacttgaatgaagtgttatcctgc
tctggttctgaatga

DBGET integrated database retrieval system