Vigna angularis (adzuki bean): 108331692
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Entry
108331692 CDS
T04660
Name
(RefSeq) histone deacetylase 19-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03082
ATP-dependent chromatin remodeling
var03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108331692
03083 Polycomb repressive complex
108331692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108331692
Enzymes [BR:
var01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108331692
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
108331692
HDAC complexes
Sin3A-HDAC complex
108331692
BRAF-HDAC complex
108331692
REST complex
108331692
SHIP complex
108331692
MiDAC complex
108331692
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108331692
Heterochromatin formation proteins
Other heterochromatin formation proteins
108331692
Chromatin remodeling factors
NuRD complex
108331692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
108331692
NCBI-ProteinID:
XP_017422054
UniProt:
A0A0L9UI73
LinkDB
All DBs
Position
4:complement(34650714..34664355)
Genome browser
AA seq
493 aa
AA seq
DB search
MDSGSNSLPSAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VHKPFPARDRDLCRFHADDYVAFLRSITPETQQDHLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGI
DDESYHFLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSRHLLEEIQSKLLENLSRLQHAPSVQFQERPPDSDLGEAEEDHDGDETWDPDSDMDVD
GECELVPSKVKKEIVEPQLNGLFQDDQRRSGEHLRVSDTAVAETCMKALDISSQKADEDN
VKVEQNTVNDLTK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggattccggcagcaattctttaccatctgcacctgatggggttaagagaaaggtttgc
tatttctatgatccagaggttgggaattactattacgggcaaggtcaccctatgaagcca
catcgtatacggatgacacatgctcttcttgctcattatggattgcttcagcacatgcag
gtccataagccatttcctgctagagaccgggacctttgtcgttttcatgccgatgattat
gttgcattccttcgaagcataactcctgaaacacaacaggatcatcttaggcaactcaaa
cgctttaatgttggtgaagattgtcctgtttttgatggcctctactctttctgtcaaact
tatgcaggggggtcggttgggggtgcagtgaagttaaatcatgaccaatgtgatatcgct
gtcaattgggctggtgggttgcatcatgccaagaagtgtgaggcttctggattttgctat
gttaatgacatagtccttgcaatcttagaacttcttaaacagcatgagcgtgttctatat
gtggacattgatatccaccatggagatggtgtggaggaagcattctatactactgataga
gtcatgactgtttctttccataaattcggagactattttcctggtactggggatgtacgc
gatattggatatggaaagggaaaatactattctcttaatgttccacttgatgatggcatt
gatgatgagagttatcatttcttgttcaaaccaataattggcaaagtaatggaagtgttc
aggcctggtgcagtagttcttcagtgtggtgctgattctctatctggagaccgattggga
tgtttcaatctttcaattaggggacatgcagagtgtgttagatacatgagatcattcaac
gtgcccctcttgctactaggtggtggtggctacaccattcggaatgttgctcgctgttgg
tgctatgagacaggagttgctcttggaatagaagttgatgacaaaatgccacaacacgag
tattatgaatattttggtccagattataccctacatgttgccccaagtaacatggaaaac
aagaattcccgtcatttacttgaagaaattcaatcaaagctacttgagaatctttcgagg
ctgcaacatgctcctagtgtccaatttcaggaaaggcctccggattctgatcttggagag
gcagaagaagatcatgatggagatgagacatgggatccagattctgacatggacgttgat
ggtgaatgtgagcttgttccaagcaaagtaaagaaagaaatagttgaaccacagctcaac
ggtctgtttcaggatgaccagagaagaagtggggaacatttgagagtctctgatactgca
gttgctgaaacttgcatgaaggctctagatatttcttctcagaaagctgatgaagataat
gtgaaagttgaacagaatactgtgaatgatttgaccaaatag
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