KEGG   Vigna angularis (adzuki bean): 108332052
Entry
108332052         CDS       T04660                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03082  ATP-dependent chromatin remodeling
var03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108332052
   03083 Polycomb repressive complex
    108332052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:var03036]
    108332052
Enzymes [BR:var01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108332052
Chromosome and associated proteins [BR:var03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     108332052
   HDAC complexes
    Sin3A-HDAC complex
     108332052
    BRAF-HDAC complex
     108332052
    REST complex
     108332052
    SHIP complex
     108332052
    MiDAC complex
     108332052
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     108332052
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108332052
  Chromatin remodeling factors
   NuRD complex
    108332052
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 108332052
NCBI-ProteinID: XP_017422644
LinkDB
Position
4:complement(8495775..8501417)
AA seq 464 aa
MARGERAETESGASLPSVGTDAMKRRVTYFYEPCIGDYYYGQGHPMKPHRIRMAHNLIVH
YGLHRRMQVNRPFPAAEADIGRFHSDDYVEFLASVSPQILSENSHSHYRQLKRFNVGEDC
PVFDGLFDFCRASAGGSIGAAVRLNRADADIAINWAGGLHHAKKAEASGFCYVNDIVLGI
LELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGAGK
NYSLNVPLNDGLDDETFRSLFRPVIQKVMNVYQPDAVVLQCGADSLSGDRLGCFNLTVKG
HADCLRFLRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPNPKLPYNEYYEYFGPD
YTLHPEPSNMENLNTPRDLEKIRNALLEQLSKLPHAPSVPFQTTPSIIQVPEEEEEHMDI
RPKRRIWSGEDFDSDNDDDMASSKNSVLTAQTSSRCGADGMDED
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggcgagaggagagagagcagagacggagagtggcgcgtcgttaccgtcggtgggtacg
gacgccatgaagcggagagtcacgtatttctacgaaccctgcatcggcgactactactac
ggtcaaggacatccaatgaagccgcaccgcattcgcatggcccacaacctcatcgtccac
tacggtctccaccgccgcatgcaggttaatcgtccctttccggcggcggaagcagacatc
ggccgtttccactccgatgactacgtcgagttccttgcctccgtttcgccgcaaatccta
tccgagaactcccactcccactaccgccagctgaagcgcttcaacgtcggggaggactgc
cccgtcttcgacgggctcttcgacttctgccgcgcatccgccggtggctccattggcgcc
gccgtccgactcaaccgcgccgacgccgacatcgccatcaactgggccggcggcctgcat
cacgccaagaaggctgaggcctccggcttctgctacgtcaacgacattgttctcggcatt
cttgaacttctcaaagttcataggcgtgtgctgtatattgatattgatgttcaccatgga
gatggggtcgaggaggcattctacactactgatagggtcatgacagtgtcatttcacaag
tttggggattttttcccaggaactgggcacattaaagacattggggttggtgctggaaag
aattattctctaaatgtcccactcaatgatggattggatgatgagactttccgttctctg
tttcgccccgtcattcaaaaagtcatgaatgtttatcaaccggatgcagttgttcttcag
tgtggagctgattccttgtctggtgatcggttgggttgcttcaacttgactgtcaagggt
cacgcagattgccttcgattcctcagatcattcaatgttcctctaatggtgttgggtggg
ggaggatatacagttcggaatgttgcccgttgttggtgttatgagaccgcagtggcagta
ggagtggaacctaatccgaagttgccttacaatgaatattatgaatattttggtccagac
tatactcttcatcccgagccatccaacatggaaaacttaaacacacccagggatctggaa
aaaattcggaatgcattattggaacaactttccaagcttccccatgcacccagtgtgcct
tttcaaacaacaccatcaattatacaagttcccgaagaggaagaggagcacatggatata
agaccaaaacgtcgcatatggagtggtgaagattttgattctgataacgatgatgacatg
gctagttcaaagaactctgttttaactgcccaaacgagcagcaggtgtggtgcagatggg
atggacgaagattaa

DBGET integrated database retrieval system