Vigna angularis (adzuki bean): 108332052
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Entry
108332052 CDS
T04660
Name
(RefSeq) histone deacetylase 6
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03082
ATP-dependent chromatin remodeling
var03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108332052
03083 Polycomb repressive complex
108332052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108332052
Enzymes [BR:
var01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108332052
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
108332052
HDAC complexes
Sin3A-HDAC complex
108332052
BRAF-HDAC complex
108332052
REST complex
108332052
SHIP complex
108332052
MiDAC complex
108332052
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108332052
Heterochromatin formation proteins
Other heterochromatin formation proteins
108332052
Chromatin remodeling factors
NuRD complex
108332052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
108332052
NCBI-ProteinID:
XP_017422644
LinkDB
All DBs
Position
4:complement(8495775..8501417)
Genome browser
AA seq
464 aa
AA seq
DB search
MARGERAETESGASLPSVGTDAMKRRVTYFYEPCIGDYYYGQGHPMKPHRIRMAHNLIVH
YGLHRRMQVNRPFPAAEADIGRFHSDDYVEFLASVSPQILSENSHSHYRQLKRFNVGEDC
PVFDGLFDFCRASAGGSIGAAVRLNRADADIAINWAGGLHHAKKAEASGFCYVNDIVLGI
LELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGAGK
NYSLNVPLNDGLDDETFRSLFRPVIQKVMNVYQPDAVVLQCGADSLSGDRLGCFNLTVKG
HADCLRFLRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPNPKLPYNEYYEYFGPD
YTLHPEPSNMENLNTPRDLEKIRNALLEQLSKLPHAPSVPFQTTPSIIQVPEEEEEHMDI
RPKRRIWSGEDFDSDNDDDMASSKNSVLTAQTSSRCGADGMDED
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaggagagagagcagagacggagagtggcgcgtcgttaccgtcggtgggtacg
gacgccatgaagcggagagtcacgtatttctacgaaccctgcatcggcgactactactac
ggtcaaggacatccaatgaagccgcaccgcattcgcatggcccacaacctcatcgtccac
tacggtctccaccgccgcatgcaggttaatcgtccctttccggcggcggaagcagacatc
ggccgtttccactccgatgactacgtcgagttccttgcctccgtttcgccgcaaatccta
tccgagaactcccactcccactaccgccagctgaagcgcttcaacgtcggggaggactgc
cccgtcttcgacgggctcttcgacttctgccgcgcatccgccggtggctccattggcgcc
gccgtccgactcaaccgcgccgacgccgacatcgccatcaactgggccggcggcctgcat
cacgccaagaaggctgaggcctccggcttctgctacgtcaacgacattgttctcggcatt
cttgaacttctcaaagttcataggcgtgtgctgtatattgatattgatgttcaccatgga
gatggggtcgaggaggcattctacactactgatagggtcatgacagtgtcatttcacaag
tttggggattttttcccaggaactgggcacattaaagacattggggttggtgctggaaag
aattattctctaaatgtcccactcaatgatggattggatgatgagactttccgttctctg
tttcgccccgtcattcaaaaagtcatgaatgtttatcaaccggatgcagttgttcttcag
tgtggagctgattccttgtctggtgatcggttgggttgcttcaacttgactgtcaagggt
cacgcagattgccttcgattcctcagatcattcaatgttcctctaatggtgttgggtggg
ggaggatatacagttcggaatgttgcccgttgttggtgttatgagaccgcagtggcagta
ggagtggaacctaatccgaagttgccttacaatgaatattatgaatattttggtccagac
tatactcttcatcccgagccatccaacatggaaaacttaaacacacccagggatctggaa
aaaattcggaatgcattattggaacaactttccaagcttccccatgcacccagtgtgcct
tttcaaacaacaccatcaattatacaagttcccgaagaggaagaggagcacatggatata
agaccaaaacgtcgcatatggagtggtgaagattttgattctgataacgatgatgacatg
gctagttcaaagaactctgttttaactgcccaaacgagcagcaggtgtggtgcagatggg
atggacgaagattaa
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