Vigna angularis (adzuki bean): 108335362
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Entry
108335362 CDS
T04660
Name
(RefSeq) probable RNA-dependent RNA polymerase 1
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108335362
Enzymes [BR:
var01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
108335362
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
108335362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdRP
RNA_replicase_B
Motif
Other DBs
NCBI-GeneID:
108335362
NCBI-ProteinID:
XP_017426860
UniProt:
A0A0L9UUM9
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Position
6:complement(18860275..18866946)
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AA seq
1132 aa
AA seq
DB search
MCKTIRMHGFPATVSAEEVRKFLEQNTGPKTVHAVEVEQFKEEDPTTQVNVKFTDKKSVE
TILLLVTQHLSYGVHVLNATEIERDLLPKQRNFSHSMDDIAVHFGCQTSKNKLSVLWEHP
SASIKFGSRLRKMYIFFHYLSVDYKLQISSESVSRIELHHSDDLTKKLLLFQLRNAPLIY
EKNVSKSKYFKEACDNHWFRGVDFTPSCSIGQSSTLCFELPKSVEVPNFNQHYRNYNEVD
DSVFTLERRHLGFSSYFNFVPIVPEGFNLPYKILFKINSLIQHGCLPVLAIDDNFFQLVD
PGKVKLEYIESALHTLDQIKACCYEPAQWLEKQYKKYSENSALPVSSAISLDDGLVYVHR
VQVTPSKIYFCGPEVNLSNRVLRNYSEDTDNFLRVSFLDEDMDKLHSSDLVADMDRETKL
HERVLATLKNGIEIGDKKFEFLAFSPSQLRDNSVWMVASRTGLTASDIRKWMGEFHEIRN
VAKYAARLGQSFSSSRETVSVGRHEIKIIPDIEFRRGETKYCFSDGIGKISYELAQEVAE
KCGCGDNTPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMCKYKSENTKLDVLAWSKYKPC
YLNRQIIALLSTLGVQDRVFRKKQREVLNQLKMLSRSPLMVLDYMSTGEIAKVLKEMLIC
GFHPIKEPFLSMMLQTLYASKLQELQLKTRILVKKGRALLGCLDETRTLKYGEVFVQIAH
QRNKQNLAMSSLSSNRNASNKSKHIVKGKVVVAKNPCLHPGDVRVLRAVDVPSLHHMVDC
VVFPQKGRRPHPNECSGSDLDGDVYFVSWDPDLIPPRQENPMDHAASPAVNVDHDVTLQE
VQEYFAHYIVKDRLGIVASAHMVFADKDPQKAMSPACIELAKLHSVAVDFAKSGVPAEIP
QHLRVEEYPDFMEKADRPSYQSNSIIGKLYREVKNVAQHKSLSKPFTRRVARQSYDRDME
IDGFEKYTASASEYKNMYDFKLGNLMDYYGIETEAEIISGNILKMPKSFSERKDLEGINH
AVMSLRKEARSWFNVMIKNKSSNSQADDDAYAIASAWYHVTYHPRYWGSYNQGLNRDHFL
SFPWCVHDTLMQIKKDKIRQRTFTMNHWKLLKLIPLLLLFFLLWIIVPYLRT
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaagacaattcgaatgcatggattcccagctacagtgtcagctgaagaggtgagg
aaatttttggaacaaaatacaggccctaaaactgttcatgctgtagaggttgagcagttc
aaagaagaagatcctaccacacaagttaatgttaaatttacagataaaaaaagtgttgaa
acaatcttgctcttagttactcaacacctatcatacggtgtccatgttttaaatgctaca
gaaatagaacgtgaccttttgccaaagcagagaaacttttctcacagcatggatgacata
gcagtgcactttggatgtcaaacatccaaaaacaaactcagtgtactctgggaacatcca
agtgcttcaatcaaattcggttccagactgagaaagatgtatatatttttccattatttg
tcagtggattataagctgcagatttcttctgagagtgtgtcacgaattgagctgcatcac
tcagatgatttaaccaagaagcttctccttttccagttacgcaacgctcctctgatctat
gagaaaaatgtatccaaaagcaaatattttaaggaggcttgtgacaaccattggtttcga
ggagtagattttaccccatcatgcagcattggacaatcttctactttatgttttgagctt
ccaaaaagtgttgaagttccaaacttcaatcagcactatcgtaattataatgaagttgat
gacagtgtctttactcttgagagaagacaccttggtttctcttcttacttcaattttgtc
cccattgttcctgaaggcttcaacttgccttacaaaattttgttcaaaatcaactcacta
attcagcacggttgtcttcctgttctggcaattgacgacaacttttttcaactggttgac
cctggaaaagtaaagcttgaatatatagaaagtgccctgcatacattagatcaaataaaa
gcatgctgctatgaacctgcgcaatggttggagaaacaatataagaaatactcagaaaat
agtgcacttccagtatctagtgctatttcattggatgatgggttggtctatgtgcataga
gtacaagtaactccatccaaaatatatttctgtggtcctgaagtgaacctttctaaccgg
gttttgcgcaactattctgaagacactgataactttcttcgtgtttctttccttgatgaa
gacatggataaacttcattcatcagatttggttgcagacatggacagagaaacaaagctt
catgagagggtgctggcaacacttaaaaatggcatagaaattggtgataagaaatttgag
tttcttgccttctcaccaagtcagttgcgggataactctgtgtggatggttgcatcaaga
actggacttactgcatctgatataagaaagtggatgggagagtttcatgaaattagaaat
gtggccaaatatgcagcaaggctggggcaatcattcagttcttccagggaaacagtgagc
gttggcagacatgaaattaaaattattcctgatatagaatttagaaggggtgaaaccaaa
tactgtttctctgatggaattgggaagatatcttatgaattagctcaagaagtggctgag
aaatgtggttgtggggataatactccatctgcatttcaaatcagatatggagggtacaaa
ggtgttgttgctgttgatcctacctcatcaactaaactgtccttaagaaagagcatgtgc
aagtacaagtcagaaaacacaaaattagatgttttggcatggagcaaatacaaaccttgt
taccttaatcgtcaaataatagccctcttgtccaccctgggggtccaggaccgagtcttc
agaaagaaacaaagagaggtccttaatcaacttaaaatgctatcaagaagtcccttgatg
gtattagattatatgtccacaggagagattgcaaaggttttaaaggaaatgctcatttgt
ggctttcatccaattaaggaaccatttctctccatgatgttgcaaacattatatgcatca
aaattacaggaattgcagctcaaaactaggatacttgttaagaagggaagagcattgtta
ggatgcttggatgaaactagaactctaaaatatggagaggtattcgtgcagatagctcac
caaagaaataagcaaaatcttgctatgtcctctctttcttctaacagaaatgcatccaac
aaaagcaaacatattgttaagggaaaggtagtagttgccaaaaacccttgtctgcacccg
ggagatgtgagagttttaagagcagtggatgtaccttctctgcatcatatggtggactgt
gttgtttttccacagaaggggagaagaccacatcctaatgaatgttctggaagtgacttg
gatggagatgtctactttgtcagttgggaccctgatcttattcctcctcgtcaggaaaat
cccatggatcatgcagcatcaccagctgtgaatgtggatcatgatgttacattacaggaa
gttcaggagtattttgctcactacatagttaaagacaggttgggcattgttgcaagtgca
cacatggtgtttgctgataaggatcctcaaaaggcaatgagccctgcatgtattgagctt
gcaaagctacactcagttgccgttgattttgcaaaatctggtgtgccagcagaaattcca
caacatctacgcgtggaagagtatccagatttcatggaaaaggcagacagaccaagttac
caatcaaatagcataataggaaagctgtatcgtgaggtgaagaatgttgcacagcacaag
agtctcagcaaacccttcacaagaagagtggcaaggcaatcatacgaccgtgacatggag
attgatggctttgagaagtacacagctagtgccagtgaatacaagaatatgtatgacttc
aagttggggaacctaatggattactatggcatagaaacagaagcagaaattatcagtggc
aatatattgaaaatgccaaaatcattcagtgaaagaaaggacttggaaggaattaatcat
gctgtgatgtctctaagaaaggaagctagaagctggttcaatgtgatgataaaaaacaag
tcatcaaattctcaagctgatgatgatgcctatgcaatagcatcagcttggtaccatgtt
acatatcatcctaggtattggggatcctacaatcaagggctaaacagggatcatttcctc
agtttcccatggtgtgtgcatgacactcttatgcagataaagaaggacaaaatcagacag
agaacttttaccatgaatcactggaaattactgaaactgattccactattactgcttttc
ttccttttgtggataatagtgccttatctaaggacttga
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