Vigna angularis (adzuki bean): 108335814
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Entry
108335814 CDS
T04660
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
var04141
Protein processing in endoplasmic reticulum
var04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108335814
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108335814
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108335814
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
var01009
]
108335814
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108335814
03009 Ribosome biogenesis [BR:
var03009
]
108335814
03110 Chaperones and folding catalysts [BR:
var03110
]
108335814
04131 Membrane trafficking [BR:
var04131
]
108335814
03051 Proteasome [BR:
var03051
]
108335814
03029 Mitochondrial biogenesis [BR:
var03029
]
108335814
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
var04147
]
108335814
Protein phosphatases and associated proteins [BR:
var01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108335814
Spliceosome [BR:
var03041
]
Complex B
Other components
Prp19 complex
108335814
Complex C
Prp19-CDC5 complex
108335814
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108335814
Chaperones and folding catalysts [BR:
var03110
]
Heat shock proteins
HSP70 / DNAK
108335814
Membrane trafficking [BR:
var04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108335814
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108335814
Proteasome [BR:
var03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108335814
Mitochondrial biogenesis [BR:
var03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108335814
Exosome [BR:
var04147
]
Exosomal proteins
Proteins found in most exosomes
108335814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
Motif
Other DBs
NCBI-GeneID:
108335814
NCBI-ProteinID:
XP_017427474
UniProt:
A0A0L9UU07
LinkDB
All DBs
Position
6:18506611..18508872
Genome browser
AA seq
618 aa
AA seq
DB search
MGKEDKKFAVGIDLGTTYSCVAVWLEQHSRVEIIHIQQGDKTTPSFVAFTDKHRFIGEVA
RIQSVTNPENTVFDAKRLIGRKFSDPFIQKEKMLWPFKVGAGANDKPMIVVKYKGQEKFL
CAEEISSMVLMQMREIAEAYLETPVKNVVVTVPAYFNDSQRKATKDAGTIAGLNVMRIIN
EPTAAAIAYGLDKKTNCVGERNVFIFDLGGGTFDVSLVTIQNKVFQVRATAGNTHLGGED
FDNRMVNYFVKEFNSKNKVDISGNPRALRRLRTACERAKRILSYDITTDIELDALFKGID
FCFSITRAKFEEINMELFEECMETVDRCLRYAKMDKSSVDDVVLVGGSSRIPKVQELLRD
FFDGKDLCKSINPDEAVAHGAAVQAALLNEGMKNVPILELLDVTPLSLGISTHPDVMGVV
IPRNTTIPVSKIEVFHTTNDNQYRVRIEVYEGERARASDNNLLGSFVLSGFPPAPRGHPL
NVCFAIDSNGMLTVSAEEKTTGNKNEIIITNDKERLSPEEIMKLIQEAENFQAEDKKFLR
KSKAINSLDEYVYKMNKALEKKDMISKLSSSTRERISLAIKKGTELLDGKNQHEEAYVFE
DYLKKLESLYEETIGKNG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagaagataagaaatttgccgtaggaatcgaccttggtacaacgtattcctgc
gttgcagtttggctggagcaacacagcagagtggagataatccacattcagcaaggcgat
aaaaccacaccttcttttgttgccttcactgacaaacatagattcattggtgaagttgct
cggattcagtctgtcaccaatccagaaaacactgtttttgatgcgaagaggttgattggt
aggaaattcagtgatccctttattcaaaaagagaaaatgttatggccattcaaggttggt
gcaggtgctaacgacaagcctatgatcgtggttaaatacaagggtcaggagaagttcctc
tgtgccgaagaaatctcatctatggttctcatgcagatgcgggagattgccgaggcgtac
ttggaaacacctgtgaagaatgttgttgtcacagtgcctgcttatttcaatgactctcaa
cgtaaagccaccaaagatgccggtaccattgctggtctcaatgttatgaggataatcaat
gagccaactgctgcagctattgcatatggccttgacaagaagactaactgtgttggggag
cgaaatgttttcatttttgatcttggcggtggtacttttgatgtgtctctcgtcacaatt
cagaacaaggtcttccaagttcgggcgaccgctggaaacactcatctgggaggagaagat
tttgacaatcgaatggtgaactactttgtgaaggagttcaacagtaagaacaaggtagat
attagtgggaacccgagagccctaaggaggttgagaactgcatgtgagagggcaaaaagg
atactgtcatatgatatcaccacagacattgagttagatgcgttatttaagggcattgac
ttctgcttttcaatcactcgtgcaaagtttgaggaaattaatatggagctctttgaagaa
tgtatggagacagttgatagatgtcttaggtatgctaagatggacaagagcagtgtagac
gatgttgtgcttgttggtggttcttccaggattccaaaagtgcaggaactactgcgtgac
ttctttgatggaaaggatctgtgcaagagcatcaaccctgatgaggctgttgctcatggt
gcagctgttcaggctgctttgctgaatgaaggcatgaagaatgttccaatcttggagcta
ctggatgttacacctctatcccttggtataagcacacatccagatgtcatgggtgtggtc
attcccaggaacactaccattcccgtgagcaagatagaagtattccacacaacaaacgat
aaccaatatagagtgcggattgaagtttacgagggtgagagagcaagagccagtgataac
aatttgttaggttcttttgttctttctggatttcctcctgctcctcgtggtcatcctttg
aatgtatgctttgccatagattcaaatggtatgttaactgtttcagctgaggaaaaaacc
actggaaataagaatgagattatcataaccaatgataaagagagactgtctcctgaagaa
attatgaaactgattcaagaagctgagaattttcaggcggaagataagaaattccttaga
aagtccaaagcaattaattctttggatgaatacgtttacaagatgaataaggctttggaa
aagaaagatatgatttctaaacttagctcatcgacaagggagaggattagtttggcaatt
aagaagggtacagaattgctggatggtaaaaatcagcatgaggaagcatatgtatttgag
gattatctgaagaagcttgagagcctctatgaagaaacaataggcaagaatgggtag
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