Vigna angularis (adzuki bean): 108335856
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Entry
108335856 CDS
T04660
Name
(RefSeq) histone deacetylase 6-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03082
ATP-dependent chromatin remodeling
var03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108335856
03083 Polycomb repressive complex
108335856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108335856
Enzymes [BR:
var01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108335856
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
108335856
HDAC complexes
Sin3A-HDAC complex
108335856
BRAF-HDAC complex
108335856
REST complex
108335856
SHIP complex
108335856
MiDAC complex
108335856
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108335856
Heterochromatin formation proteins
Other heterochromatin formation proteins
108335856
Chromatin remodeling factors
NuRD complex
108335856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
108335856
NCBI-ProteinID:
XP_017427570
UniProt:
A0A8T0LBK6
LinkDB
All DBs
Position
1:31456067..31459320
Genome browser
AA seq
475 aa
AA seq
DB search
MGMMEEESSNSNTEGGASLPSSGSDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHN
LIVHYSLHRRMEINRPFPASPNDIRRFHSDDYVHFLSSVSPETLADTSFSRQLKRFNVGE
DCPVFDGLFDFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVL
GILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGS
GKNYAVNVPLNDGMDDENFRGLFRTVIHKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSV
KGHADCLRFIRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFG
PDYTLYVDPSNMENLNTPKDMEKIRITLLEQISRLPHTPSVPFQTTPPTLEIPEEAEEGM
DRRPKLRKWDGEDYDSDPDEGEKANSKFSSVTAHMRDIADDMEEEKPGVHPSSCC
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgatggaagaggagagtagcaacagcaacacagaaggtggagcttcgcttcca
tcgtcaggttcagacgccaagaagcgaagagttacgtacttttacgaaccaactatcggc
gattactactacggtcagggccacccaatgaagccgcaccgcatccgcatggcgcacaac
cttatcgtccactactccctccatcgccgcatggagattaaccgccctttcccagcctcc
cccaacgacattcgccgctttcactccgatgactacgttcacttcctctcttccgtctct
cccgagaccctcgcggacacctccttctcgcgtcaactcaagcgcttcaacgtcggcgaa
gactgtcctgtcttcgacggcctcttcgacttctgtcaggcttccgctggtggctccatc
ggcgccgccgtcaaactcaaccgcggcgacgccgacatcgccatcaattgggccggcggc
ctccaccacgccaagaaatccgaagcctctggattctgttacgtcaacgacattgttctc
ggtatcctcgagcttctcaaagttcacaggcgagttctgtatgttgacattgatgttcac
catggtgatggggtcgaggaggccttttacaccactgatagagtgatgacagtctctttt
cacaagtttggtgattttttccctggcacaggccatatcaaagacattggggtgggctcg
ggaaagaattatgctgtcaatgttccattaaacgacggaatggatgatgaaaattttcgt
ggtctgtttcgaacggtcattcataaagtcatggaggtttatcaacctgaggcagttgtt
cttcaatgtggagctgattcattgtctggtgacaggttgggttgcttcaacttgtctgtg
aaaggtcacgcagattgccttcgattcattagatctttcaatgttccattaatggttttg
ggtggtggtggatatacaattcggaatgttgcccgctgttggtgttatgagacagcagtg
gcagtaggagttgagcctgacaataagttgccttataatgaatattatgaatattttggt
ccagattatactctctatgtcgatccaagcaacatggagaacctaaacacacccaaggat
atggaaaaaataaggatcacactgctagaacagatttcccgacttccccatactcccagt
gtaccttttcagacaacaccacctaccttagaaattccagaagaggcggaagaaggcatg
gatagaagaccaaaacttcgcaaatgggatggcgaagattatgattctgaccctgatgaa
ggtgaaaaagctaattccaagttctcaagtgtcactgcccatatgagggatattgcagat
gacatggaagaagagaagccaggagtgcatccctcatcttgttgttga
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