Vigna angularis (adzuki bean): 108336215
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Entry
108336215 CDS
T04660
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
var04131
]
108336215
04121 Ubiquitin system [BR:
var04121
]
108336215
Enzymes [BR:
var01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108336215
Membrane trafficking [BR:
var04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108336215
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108336215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zinc_ribbon_9
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
CxC4
zf-Nse
zf-ANAPC11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
108336215
NCBI-ProteinID:
XP_017428058
UniProt:
A0A0L9UVX0
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Position
7:complement(3431470..3434389)
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AA seq
337 aa
AA seq
DB search
MSSGATHWCYACRQPIVLDGGDTLCPYCDGGFVQELDELRGAAPAPQHSYSSSQSGEFHQ
MPDLFDAIHAFMGQRGSDQRFGLMDAVDNFMRHRMAGRNSNFDVRARSGSFPAPEQSWGV
FSSGPYLIFHGQVPGFSLATGSPRGGPRRVDFGDYFMGPGLEELIEQLTMNDRRGPPPAA
RSSIDAMPTIRITQAHLRLDSHCPVCKDKFELGTEAREMPCNHIYHSDCIVPWLVQHNSC
PVCRVELPPQGQVSSRSARSFGGRNASTSSGTDSSSRSRENSSPQNHGRRNPLSFLWPFR
SSSSSNNSHYSETGGSSSSTTPDQNNGTSYSGWPFDH
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggagcaacgcactggtgttatgcgtgcagacaaccaattgtgcttgatggg
ggagacactctctgtccttactgtgatggaggttttgtacaagaacttgatgagttgcga
ggagcagcacctgcaccccagcattcatattcttcatcacagtccggagagtttcatcaa
atgcctgacctttttgatgctatacatgctttcatggggcaaagaggttctgaccagaga
ttcgggcttatggatgctgttgataatttcatgaggcatagaatggctggaagaaactca
aactttgatgttagagcaaggtcgggttctttcccagctcctgaacagagttggggtgtt
ttcagttctggtccttatttaatatttcatggtcaagttcctggattctccttggccact
ggcagcccaagaggtggtcctaggcgtgttgattttggtgattactttatgggtcctgga
ctggaagaactcattgagcaactcaccatgaatgacaggcgaggtccaccaccggcagca
cgttcttcgatcgatgctatgcctactattaggataacacaggcacatcttcgcttggat
tcacactgtccagtttgtaaagataaatttgaactaggcactgaagccagagagatgcca
tgcaaccatatctaccattctgactgcattgttccttggttggttcagcataactcgtgt
cctgtttgccgtgttgagttgccacctcaaggacaggttagttcccgcagtgctcgaagt
tttggaggaaggaatgccagcaccagcagtggcactgacagcagctccaggagcagggag
aacagcagccctcagaaccatggaaggagaaaccccttatcatttttatggccatttcgc
tcctcttctagctcaaacaatagtcattattctgagactggtggaagcagctcttcaacc
actcctgatcagaataatggaacgagttatagtggatggccttttgatcactag
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