Vigna angularis (adzuki bean): 108342097
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Entry
108342097 CDS
T04660
Name
(RefSeq) regulator of nonsense transcripts UPF3-like
KO
K14328
regulator of nonsense transcripts 3
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
var03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108342097
03015 mRNA surveillance pathway
108342097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108342097
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108342097
mRNA cycle factors
P-body specific factors
108342097
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
108342097
NCBI-ProteinID:
XP_017435292
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Position
9:31743575..31745908
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AA seq
215 aa
AA seq
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MKGALDRTKVVLRHLPPSLSEAALLAQIDAAFADRYNWFSFRPGKISQKHISYSRAYIDF
KRPDDVVLFAEFFNGHVFVNEKGSQFKVIVEYAPSQRVPRQWSKKDGRDGTIYKDSEYLE
FLELLSKPVENLPSAEIQLEKREAERSGAAKDIPISTPLMDFVRQKRAAKGPRRSLSNGK
VSRRGTSSNGSPSSGTSRRGSGKKRVSATMVLCTF
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtgcgttggatcggacgaaggtggtgctgcgtcacttgccgccctctctttct
gaggccgcgcttttggcccaaattgatgccgccttcgctgaccgctacaactggttttct
ttccgtcctggcaaaatcagccagaagcatatatcatattctagagcctacattgacttc
aagaggccagatgacgttgtactgtttgcggagttctttaatggacacgtctttgtgaat
gaaaagggatctcagttcaaagttattgttgaatatgctccttcccaacgcgttccaaga
cagtggtctaaaaaggatggtcgtgatgggaccatatataaagattctgagtatctggag
tttcttgaactactttccaagcctgttgagaatcttcccagcgctgagatacaattggag
aagagagaagcagaacgatctggtgctgcaaaagatattcctataagtacaccactgatg
gattttgtgcgccagaaaagagctgccaagggacctcggaggtcgttatccaatggcaaa
gtgagtcgaagaggcacttcatcaaatgggagtcctagttctggcacatcaagacgaggt
tccggaaagaagagggtttctgctactatggtattgtgcactttttga
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