Vigna angularis (adzuki bean): 108347575
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Entry
108347575 CDS
T04660
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
var03009
]
108347575
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108347575
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
Pre-60S particles
Helicases
108347575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
P-loop_SecA
DUF2737
Pec_lyase_N
Motif
Other DBs
NCBI-GeneID:
108347575
NCBI-ProteinID:
XP_017442399
LinkDB
All DBs
Position
11:26422959..26428074
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AA seq
781 aa
AA seq
DB search
MGGEGRAAMKKKKKNTKSGGFESLGLSPNAFKGIKRKGYKVPTPIQRKTMPLILSGSDVV
AMARTGSGKTAAFLVPMIQRLNQHIPQSGVRALILSPTRDLALQTLKFTKELAHFTDLRI
SLLVGGDSMESQFEELAQSPDIIIATPGRLMHHLSEVDDMSLRSVEYVVFDEADCLFGMG
FAEQLHKILAQLGENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDLETKISPDLKLAFF
TLRQEEKYPALLYLIREHIGSDEQTLIFVSTKHHVEFLNVLFRQEGIEPSVCYGDMDQDA
RKIHVSRFRSRKTMLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTG
TAYSFVTPEDMAYLLDLHLFLSKPIKPAPTEEELLQDMDGVMSRCDQAMANRETIYGRFP
QKVIDLFSDRVREVMDTSAELELLQRTCKNAFRLYSKTKPLPAKESIRRVKDLPREGLHP
MFMKVLETGELTALAFSEHLKKFRPKQTILEAEGEAAKSKHQQGPSGQWGDVMKRKRAIH
ENIINLVHEQQQSKDNMEKEEIESELNPSMEKGRKAARGSKRKTQSFKDEDHYISSIPKN
QHMEAGLSVKANEDFASNRLDSAVLDLVADDGAGIHKQRSMYHWDKRSKKYIKLNNGDRV
AANGKIKTESGAKTKATKTGLYKKWKERSHGKISLRGTNDGDPQESTSLAGSYQRGRRNF
RGSKKQHSMPNAHVRSEIKDMDQIRKERQQKANRTSYIKSKSTKGKKFGKNGKSGKRRKA
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcgaaggaagggcggcgatgaagaagaagaagaagaacacaaaatctgggggc
ttcgagtcactgggtctgagtccgaatgcgttcaagggaatcaagcgcaaagggtacaaa
gttcccactcccattcagcgcaagaccatgcccctcatcctctctggctcggacgtcgtt
gccatggctcgcaccggctccggcaaaacggctgcgtttctcgtccccatgattcagcgc
ctcaaccagcacatccctcagtctggagtcagagccctgattctgtctcccactagggac
ctcgcccttcagactctcaagttcaccaaagagcttgcccacttcacagaccttcgtatc
agtttgttggttggcggcgatagcatggagagtcagtttgaggaattggctcagagtcct
gacattataattgccactcctggcaggctcatgcatcatttgtcggaagttgatgacatg
tccttgcgcagcgtcgagtacgttgttttcgatgaggccgattgtttgtttggcatgggt
tttgccgagcagttgcataagattcttgctcagctcggggagaatcgccagaccttgctt
ttcagtgccacattacccagtgctcttgctgaatttgcaaaggctggtctgagagaccct
cagcttgttcgcctcgacctggagactaagatcagccctgacttgaagctcgccttcttc
accttgaggcaggaggagaagtaccctgccctgctttacttgatcagggaacatattggt
tctgatgagcagacattgatttttgtgtccaccaaacatcatgtagagtttctcaatgtc
ttgtttcgccaagagggtattgagccgtctgtgtgttatggcgacatggatcaggatgct
cgaaaaatccatgtatccaggtttaggtctaggaagaccatgttgttgattgtcaccgac
gttgcggctcgtggcatcgacattccattgcttgataatgttatcaattgggacttcccc
cccaagcctaaaatatttgtccatcgagttggaagggctgcaagggctggtcggactggt
actgcatattcttttgtgactcctgaggatatggcctacctcttggatcttcatttgttt
ctttcaaaacccatcaaacctgctcccactgaagaagagctcttgcaggatatggatggt
gtaatgtctagatgtgatcaggcaatggcaaatagagaaaccatttatggtcgtttccca
caaaaagtcattgaccttttttcagacagagtcagggaagttatggatacttctgcagaa
ctggaattgttgcagaggacctgtaaaaatgcatttcgtttatattcaaaaacaaaaccc
ttacctgccaaggagtccatcagaagagtaaaggatttgcctcgtgaagggctgcatcca
atgttcatgaaggtgttggaaacgggagagttaacagcacttgcattttctgagcatttg
aagaagtttaggccaaaacaaaccattttggaagccgaaggagaagcagctaaatcaaag
catcaacagggcccttccgggcaatggggcgatgtgatgaaaaggaaaagagccattcat
gagaatattataaatttggtccacgaacaacagcaatctaaggataatatggaaaaggag
gaaatcgaatcagaactcaatccttccatggagaaaggaagaaaagcagcacgtggttct
aagagaaagacccaaagtttcaaggatgaagatcactatataagttcaataccaaaaaat
caacatatggaggctggcctttcagtaaaagccaatgaagactttgcttcaaatagattg
gactccgctgtccttgatctagtggcagatgatggtgctggtattcacaaacaaagatct
atgtatcactgggataagaggagtaaaaagtacatcaagttaaacaatggtgatcgtgtt
gctgcaaacggaaagataaagacagagagtggtgcaaaaacgaaggccaccaagactggt
ttgtataagaagtggaaagaacgttcacatggtaagatatcacttagagggacaaacgac
ggtgatcctcaggaatcaacaagtttggcaggatcttaccaaagaggtcgtaggaatttt
agaggcagcaagaagcagcattcaatgcccaatgctcatgtgcgttcagaaatcaaagat
atggatcaaattcgaaaggaaaggcagcaaaaggccaacaggacttcttatatcaaaagc
aagtcgacgaagggtaaaaagtttggtaaaaatggtaaaagtggtaaaagaagaaaagcc
aaatag
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