Vibrio anguillarum NB10: VANGNB10_cI2215c
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Entry
VANGNB10_cI2215c CDS
T03657
Symbol
rumA
Name
(GenBank) 23s rrna (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vau
Vibrio anguillarum NB10
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vau03009
]
VANGNB10_cI2215c (rumA)
Enzymes [BR:
vau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
VANGNB10_cI2215c (rumA)
Ribosome biogenesis [BR:
vau03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VANGNB10_cI2215c (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
Methyltransf_11
RrnaAD
Met_10
MTS
Cons_hypoth95
Methyltransf_15
Methyltransf_23
Methyltransf_32
Methyltransf_4
Methyltr_RsmB-F
PrmA
DOT1
Ubie_methyltran
Methyltransf_12
DREV
UPF0020
CMAS
Ribosomal_L22
Motif
Other DBs
NCBI-ProteinID:
CDQ51127
UniProt:
A0A1Y0NWU5
LinkDB
All DBs
Position
1:complement(2575236..2576558)
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AA seq
440 aa
AA seq
DB search
MARFFQPKKKAQLETKHQTVLIERLDHQGSGIAYQHNKLLFVDGALPGEQVLMQLTESKS
KYSRGQLIKVLTASEQRVTPFCRHYGQCGGCDLQHLEHSAQVAHKEQTLSQLMSKFAGQT
LALSPAISCADKGYRRRARISVLWDKKQQQLQFGFRKKQSKQIVNVTDCPMLEPQLNTLL
TPIQALLTQFKSQQAIGHVELVLGDQGAVMVLRHLQPLPSEDHAALLAFAQQHHLTLYVM
PESDQLERLHGEMASYRETGSVIEFLPSNFIQVNRQVNQKMVAQALEWLALTEDDRVLDL
FCGVGNFSLPMAQYAQSVVGIEGVDEMVEQATQNAQRNQIDNITFYQANLEQDMSTQAWA
KQKFAKVLLDPARAGAAGIVDQLAKLGAQRVVYVSCNPATLARDSQSLLSQGYKLVKLGM
LDMFPHTSHLESMALFVKSR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcacgttttttccaaccgaaaaagaaagcgcaattagaaacaaaacatcaaacggta
ttgattgaacgtcttgatcatcaaggttctggtatcgcttatcaacacaataaactgctt
tttgttgatggcgcgctgcccggtgagcaagtgctgatgcagctaactgaaagcaaaagt
aaatactctcgcggtcagttgattaaagtcttaacggccagtgaacaacgcgtgacgcca
ttttgtcgccattacggtcaatgtggtggttgcgatctgcagcatttagagcacagtgca
caagtggcgcacaaagagcaaacactctcgcaattgatgagtaaattcgccggacaaacg
ttggcattgagccccgcaataagttgcgccgataaaggctatcgccgccgcgcccgcatc
agcgtgttgtgggacaaaaagcagcaacagctgcaatttggctttcgcaaaaagcagagc
aagcaaatcgttaacgtgacggactgcccaatgctagaaccacaactcaacacgctactt
acacctatccaagcgctgttaacgcaatttaaatctcagcaagcgattggccatgttgaa
ttggtgctgggtgatcaaggcgcggtgatggtgttgcgccatcttcagccgctgccaagt
gaagatcacgcggcgctgctggcgtttgctcagcagcatcatctcactttgtatgtgatg
ccagaaagcgatcagctcgaacgtcttcacggagagatggcaagctaccgtgaaaccgga
tcagttatcgaatttttgccctccaactttattcaagtcaatcgtcaagtaaaccaaaaa
atggtggctcaagcattggaatggttagccttgactgaggatgaccgagtgttggaccta
ttttgtggcgtagggaactttagtttgccgatggcccaatacgctcaatcggtagtgggc
attgaaggtgtggatgagatggttgagcaagcgacacaaaacgcgcagcgcaatcaaatc
gacaatatcacgttctaccaagcaaatttggaacaagatatgtcaacgcaagcgtgggca
aagcaaaaatttgctaaagtactactcgacccagcgcgagcaggagcggcaggcattgtc
gaccaattggctaagctcggcgctcagcgcgtggtgtacgtttcttgtaacccggcgaca
ctggcaagagacagtcaaagtttactcagccaaggttataagttggtaaaacttggcatg
ttggatatgtttccacacaccagtcatttagaatcgatggcgctatttgtaaaaagtcgg
tag
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integrated database retrieval system
