Nibricoccus aquaticus HZ-65: CMV30_09300 Help Entry CMV30_09300       CDS       T05426                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism vbh  Nibricoccus aquaticus HZ-65 Pathway vbh03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:vbh00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     CMV30_09300  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:vbh03400]     CMV30_09300 Enzymes [BR:vbh01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      CMV30_09300 DNA repair and recombination proteins [BR:vbh03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      CMV30_09300 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_N DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme Motif Other DBs NCBI-ProteinID:  ATC64134 UniProt:  A0A290Q6K7 LinkDB All DBs Position complement(2293536..2295170) Genome browser AA seq 544 aa AA seqDB search MSLQEYRRKRNFKKTAEPAPKVDRQNRRRFVIQKHDATRLHYDFRLELGGTLKSWAVPKG LPLAHGDKRLAVHVEDHPVSYIAFEGTIPKGQYGGGTVMLWDEGIFETDDPHPLKTLEKG KLHFTLKGKKLKGAWYLVRLRDSDEWLIIRGGDDHKPISKKLDDTSVRSKKSMAQLAKSD RVWESKPINDSSLKTRLQKLAAKPEARKTEPTKPKRKSGPAPKFIAPMQALLVDEPERSG EWLYEIKFDGFRALAFKHGDSVHLLSRNEKDFAEKFPEIADAMAELAIDDAILDGEIVAL NKKGLSSFQLLQGLEDGERPPLYFYVFDLLQLDGQSLLNQPLTERKAALEKLLRKPPAAI RYSASLTGKLPALMKRVQHLGLEGLIGKRPGSLYEPGKRSGAWIKLKISHEQEFVIGGYT PPAGSRKHLGALIVGVYENKKLICTGKVGTGFNHALLKSLHTRFAKIARKECPFDNLPDK RERRFGQAITASVMKKCHWVKPELVAQLRFTEWTNDGRLRHPVFLGLREDKKATDVVREK PART NT seq 1635 nt NT seq  +upstreamnt  +downstreamnt atgtcgctccaagaatatcgccggaagcggaatttcaaaaaaaccgccgagcccgcacct aaggtcgaccgccagaatcgccgccgcttcgtcatccagaaacacgacgccacccgcctc cactacgacttccgcctcgaactcggcggcacgctcaaatcctgggccgtccccaaaggc cttccgctcgcgcacggcgacaaacgcctcgccgttcacgttgaggatcaccccgtttcc tacatcgccttcgaaggcaccatccccaaaggccagtacggcggcggtaccgtcatgctc tgggacgaaggcatcttcgagaccgacgacccgcatccgctcaagactctcgagaaagga aaactccacttcaccctcaaaggcaaaaaactcaaaggcgcctggtacctcgtgcgcctg cgcgacagcgacgagtggctgatcattcgcggtggcgacgatcacaaaccgatctccaaa aaactagacgacacgtccgtccgctcgaaaaaatccatggcgcaactcgcgaagagcgat cgcgtttgggaatcgaagcccatcaacgactcctcgctaaaaactcgtcttcaaaaactc gccgcaaaaccggaggccaggaagaccgagcccacgaaaccgaaacgcaaaagcggcccc gccccgaaattcatcgcccccatgcaggcgctcctcgtcgacgagcccgaacgcagcggc gaatggctctacgaaatcaaattcgacggcttccgcgccctcgccttcaaacacggcgac tccgtccacctcctctctcgaaacgaaaaagacttcgccgaaaaattccctgagatcgcc gacgccatggctgaactcgccattgatgacgcgatcctcgacggcgaaatcgtcgccctg aacaaaaaaggcctatcctcattccagctcctccaaggcctcgaagacggcgagcgcccg cctctctacttctacgtgttcgatctcctccagctcgacggccaaagcctcctcaaccag ccgctcaccgagcgcaaagccgccctcgaaaaactcctgcgcaaaccgcccgccgcgatc cgttactctgcatcgctcacaggaaaactccccgcgctcatgaagcgcgtccaacacctc ggcctcgaaggcctcatcggcaaacgccccggctcgctctacgaacccggcaagcgctcg ggtgcgtggataaaattaaaaatctcgcacgaacaggaattcgtcatcggcggctacacg ccgcccgctggtagccgcaagcatctcggcgcgctcatcgtcggcgtctacgagaacaaa aaactcatctgcaccggcaaggtcggcaccggcttcaaccacgcgctgctcaaatcgctc cacacccgcttcgccaaaatcgcccgcaaagaatgccccttcgacaacctccccgataaa cgcgagcgccgcttcggccaggccatcaccgcgtccgtcatgaagaaatgccactgggtg aagcccgaactcgtcgcccaactccgcttcaccgaatggaccaacgacggtcgcctccgc caccccgtcttcctcggcctccgcgaagacaaaaaagccaccgacgtcgtccgcgaaaaa cccgcccgcacatga

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