Variovorax boronicumulans: CKY39_03770
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Entry
CKY39_03770 CDS
T05068
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00521
Streptomycin biosynthesis
vbo00523
Polyketide sugar unit biosynthesis
vbo00541
O-Antigen nucleotide sugar biosynthesis
vbo01100
Metabolic pathways
vbo01110
Biosynthesis of secondary metabolites
vbo01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CKY39_03770 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CKY39_03770 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CKY39_03770 (rfbC)
Enzymes [BR:
vbo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CKY39_03770 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ATA52429
UniProt:
A0A1E7U682
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All DBs
Position
850619..851167
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AA seq
182 aa
AA seq
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MKVTQTAIADVLLIEPKVFGDARGFFFESFNQKAFDEAVGQRVDFVQDNHSRSTKGVLRG
LHYQVQQPQGKLVRVVRGAVFDVAVDIRRSSPTFGQWVGSELSEDNHRQLWVPPGLAHGF
LVLSESADFLYKTTDYYAPAHERCIAWNDPTLAIEWPDTGIAPKLSAKDAAAPTFLSAEI
PG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcacgcagacggccatcgccgacgtgttgctgatcgaacccaaggtgttcggc
gacgcacgcgggtttttcttcgagagcttcaatcagaaggctttcgacgaagccgtcggc
cagcgcgtcgacttcgttcaggacaaccactcgcgctccaccaagggggtcttgcgaggc
ctccattaccaggtgcagcaaccacagggaaaactggtgcgcgtggttcgaggggcggtg
ttcgacgtggcggtggacatccgccggtcgtcgccgaccttcgggcaatgggtgggcagt
gaactgtcggaagacaaccatcggcagttgtgggttccgccgggtctcgcgcacggcttc
ctggtgctcagcgagtcggctgattttctgtacaagacgacggactactacgcaccggcg
cacgagcgctgcattgcgtggaacgaccccacgttggcgatcgagtggcctgacacgggc
atcgcgccgaagctgtccgccaaggacgcggcagcgccgaccttcctgagcgccgaaatt
cccggctga
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