Variovorax boronicumulans: CKY39_08450
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Entry
CKY39_08450 CDS
T05068
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
vbo
Variovorax boronicumulans
Pathway
vbo01501
beta-Lactam resistance
vbo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CKY39_08450
01503 Cationic antimicrobial peptide (CAMP) resistance
CKY39_08450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_08450
01504 Antimicrobial resistance genes [BR:
vbo01504
]
CKY39_08450
Transporters [BR:
vbo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CKY39_08450
Antimicrobial resistance genes [BR:
vbo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CKY39_08450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
ATA53236
UniProt:
A0A250DFW9
LinkDB
All DBs
Position
complement(1864165..1867329)
Genome browser
AA seq
1054 aa
AA seq
DB search
MAQFFIDRPIFAWVLSIVVMLAGLMAIRTLPLEQYPDIAPPRVSINATYTGASAKTVEDS
VTQVIEQQMKGLDNLLYMQSTSNSSGVARLSLTFNAGTNIDVAQMQVQNKLQQAMSRLPQ
QVQSRGVTVTKGGNDFLLIVSMFSGDGSASAVDVGDYISSNLVDVISRVDGVGEVQTLGT
GYAMRLWLDPDKLRKYALMPSDVGSAITAQNAQVSAGQLGALPAGAQQQLNATITARSKL
KTVEEFENVVLRATPDGAVVRLRDVARVELGAENLTVRSVLGGRPGAGMGIVLADGANAV
QVAEAVKAKVAELQPLFPNQMQTFVSYDTTPFVSASIDEVVKALAEAMVLVVLVMYIFLQ
NFRATLIPAIAVPVVLLGTFGVLSVAGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
HEEGLSPKEATRKSMAEITPALVGIALVLSAVFIPMAFFGGSTGVIYRQFSITIVSAMAL
SVFVALTLTPALCATLLKPVAKGGHAAPRKGVLGAVDRFFAGFNRRFDQGADRYQGIVGG
IVRRGKRSLVVYLLIAAVMALLFMRLPTSFLPDEDQAFLQVQVTLPPGASDARLQPVVTQ
MQDYFTKQPEVVSVNVITGQNGDQSSARAFVKLKDWAEREGAGQSAAELARRANKELSTI
RDARIFVLLPPAVRGLGANAGFNFHLKDINGLGHDALVKARDQLIDLLSKRPEVANVRSN
NLDDTPQFAVDIDDARAGAASLATSDIDSTLSSAMGGTYINDFLDNGRVKRVYMQGDTAF
RMLPTDIDRWSVRNSLGQMVPFPAFSSSRWTYGSPQLQRYNGSPSYEFVGDAAPGVSSGD
AMAAVDEVMKQMPAGIGYEWTGASFQERLSGAQAPVLYAISILFVFLCLAALYESWSVPF
SVILVVPLGIVGALLFTSLRGLSNDVYFQVGLLTTVGLSSKNAILIVEFAKQLQEQGKGV
IEATLEAVRLRLRPILMTSLAFGFGVLPLAIGTGAGAGGRQSIGTAVLGGMVVGTALGIF
FVPLFFAMIRGWLEGRRKPAETPPDALPAEQGAQ
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttcttcatcgaccgccccatcttcgcgtgggtgctctcaatcgtcgtcatg
ctcgccggcctgatggccatccgcacgctgcctctcgagcagtaccccgacatcgcgccg
ccgcgcgtgtccatcaacgccacctacaccggcgcctcggccaagacggtcgaagactcc
gtcacccaggtcatcgagcagcagatgaaggggctggacaacctgctgtacatgcagtcg
accagcaactcgtcgggcgtggcgcgcctgtcgctcaccttcaacgcgggcaccaacatc
gacgtggcccagatgcaggtgcagaacaagctgcagcaggccatgtcgcgcctgccgcag
caggtgcaaagccgcggcgtcaccgtcaccaagggcggcaacgacttcctgctgatcgtc
tcgatgttctccggcgacggcagtgcctcggcggtggacgtgggcgactacatcagcagc
aacctggtcgacgtcatcagccgcgtcgacggcgtgggcgaggtgcagacgctgggcacc
ggctacgccatgcgcctgtggctggaccccgacaagctgcgcaagtacgcactcatgccc
tccgacgtgggcagcgccatcaccgcgcagaacgcgcaggtctcggccggccagctcggc
gcgctgccggccggtgcgcagcagcagctcaacgccaccatcacggcgcgcagcaagctg
aagacggtcgaggagttcgagaacgtggtgctgcgcgccacgcccgacggcgccgtggtt
cgcctgcgcgacgtggcccgtgtcgaactgggcgccgagaacctcacggtgcgctcggtg
ctgggcggacgcccgggcgccggcatgggcatcgtgctggccgacggcgccaacgcggtg
caggtggccgaggccgtgaaagccaaggtggccgagctgcagccgctctttcccaaccag
atgcagaccttcgtgagctacgacaccacgcccttcgtgagcgcgtccatcgacgaggtg
gtgaaggcgctggccgaggccatggtgctggtcgtgctggtgatgtacatctttttgcag
aacttccgcgccacgctgatcccggccattgccgtgccggtggtgctgctgggcaccttc
ggcgtgctttccgtggcgggctactcgatcaacacgctcaccatgttcggcatggtgctg
gccatcggccttctggtggacgacgccatcgtggtggtggagaacgtcgagcgcgtgatg
cacgaagagggcctgtcgcccaaggaggccacgcgcaagtcgatggccgagatcacgccc
gcgctcgtgggcatcgcgctggtgctgtcggccgtgttcatccccatggccttcttcggc
ggctcgaccggcgtgatctaccgccagttctcgatcaccatcgtctcggccatggcgctg
tcggtgttcgtggcgctcacgctcacgccggcgctgtgcgccacgctgctcaagcctgtg
gccaagggcggccacgcggccccgcgcaagggcgtgctgggcgcggtcgaccgcttcttc
gcgggcttcaaccgccgcttcgaccagggcgccgaccgctaccagggcatcgtcggcggc
atcgtgcggcgcggcaagcgcagcctcgtggtgtacctgctgatcgcggccgtgatggcg
ctgctcttcatgcgcctgcccacctccttcctgcccgatgaagaccaggccttcctgcag
gtgcaggtgacgctgccgccgggcgcgtcggatgcgcggctgcagccggtggtcacgcag
atgcaggactacttcacgaagcagcccgaggtggtgagcgtgaacgtcatcaccgggcag
aacggcgaccagagttcggcgcgcgccttcgtgaagctgaaagactgggccgagcgcgaa
ggcgccggccagtcggccgccgaactcgcgcgacgcgccaacaaggagctctcgaccatc
cgcgacgcgcgcatcttcgtgctgctgccgccggcggtgcgcgggctcggcgccaacgcg
ggcttcaacttccacctgaaggacatcaacgggctgggccacgacgcgctggtgaaggcg
cgcgaccagctcatcgacctgctctccaagcgccccgaggtggcgaacgtgcgcagcaac
aacctggacgacacgccgcagttcgcggtggacatcgacgacgcgcgcgccggcgcggcc
agcctggccacgtccgacatcgacagcaccttgtcgagcgcgatgggcggcacctacatc
aacgacttcctggacaacggccgcgtcaagcgcgtgtacatgcagggcgacacggccttt
cgcatgctgcccaccgacatcgaccgctggagcgtgcgcaacagcctgggccagatggtg
cccttcccggccttctccagctcgcgctggacgtatggctcgccgcagctgcagcgctac
aacggcagcccgagctacgagttcgtcggcgatgccgcaccgggcgtgagctcgggcgac
gccatggccgccgtcgacgaagtgatgaagcagatgcccgccggcatcggctacgaatgg
accggcgcctcgttccaggaacgcctgtcgggcgcgcaggcgccagtgctgtatgccatc
tcgatcctgttcgtgttcctgtgcctcgcggccctgtacgagagctggtcggtgccgttc
tcggtgatcctggtggtgccgctgggcatcgtgggcgcgctgctgttcaccagcctgcgc
ggcctgagcaacgacgtgtacttccaggtcggcctgctgaccacggtggggctgtcgtcg
aagaacgcgatcctgatcgtcgagttcgccaagcagctgcaggagcagggcaagggcgtg
atcgaggcgacgctggaggccgtgcggctgcggctgcgccccatcctcatgacctcgctg
gccttcggcttcggcgtgctgccgctggccatcggcaccggcgcgggcgcaggtgggcgc
cagtcgatcggcaccgcggtgctgggcggcatggtggtcggcacggcgctgggcatcttc
ttcgtgccgctgttcttcgcgatgatccgcggctggctggaaggccgccgcaagccggcc
gaaacgccgccggatgccttgcccgcggaacagggagcccagtga
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