Variovorax boronicumulans: CKY39_11290
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Entry
CKY39_11290 CDS
T05068
Name
(GenBank) hypothetical protein
Organism
vbo
Variovorax boronicumulans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
OmpA
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
ATA53734
UniProt:
A0A250DHI6
LinkDB
All DBs
Position
2491510..2499108
Genome browser
AA seq
2532 aa
AA seq
DB search
MLFTFNPRSTHRPSWRGWAAALAAGAALLLGGAVQEANAAPAPAGIVIRSIATGTYVPNG
LAQTETISSNEVIATVLPVEALVLTQDQSLSRPPASIVTLSHLLTNTGNVASTYTLALAN
NAGGCAADTLDLSALRVVRDTNNNGVVDPADPVVQLNAAGAIALKPGETAALLVQGTIPT
AATGVACVGLTATTALQGLTAINRDTVTVGNAAALQLVKSASYPGNVIPGQTRIDFSVSG
TNIGAQDAQPSNVIAPTNTPLLVNGAPSALVLVRDPVPVGTQYVPGTLRTTAANAVKLYR
LANDPAFSYRTAEDASAVEVAIGISTPVARNVSIAMQFAVKVNADQVGEIRNTAHSQYND
GTGPATVPSNTIVISSTQARIGVAKAASTPRVNRSADGKTDGTATVRFSVNVRNYGTSWL
YGVQAADVMEGAGATQFGSYTAAAVPGANQYTIVPGSIVIAPAPSGGTVAAPNPAFKGTA
AASNLLADGAVLPVGGQFTVQFDARINFTGRTGTLLNTVKASGALNAGGPAVALDDSVNG
DNPDADGDGNPNNDTSPTPVSTQLPTLTLTKQASIARRVSPGVYELDYTFKVTNTGAVAA
PNVRVIDNLNCTFDMDKSSGQIASWELLGPPKAANGNLNAATGFTGRATCNRTTQDSADP
FQLPTEVALSLTDGARALAPGQSEQIRLSVRITEKASAIGGRVSLTNKAWAAAFEQNTVN
VTPTMLLAATATSVQALLVDPQGTVYNALTRQPVAGALVTYTRQSCSSGTAGPITAAEIY
GADSGTYTLHPNGSVSMTTGADGAYQFYLQTPPVTGLCTYALSVTPPAGSGYVYPSQLIP
VTGGSFTSCGAVVPSAVPPKDADPTSYYFQVQAGAKPDGTPCDAVHNHIPLDPGNILGLV
LRKDGSKRQVEFGDFIDYALTVTNKTGFPVTGVTFNDTLPPGFAYVANSVRLNGQVVPNP
AGGAGPGLIFHYPTLVVAPDQSAMVRYRVRIGVGAPTNGDAINRARATSGPIQSNLANWT
VRVTGGVFSDDAFAFGKVYLDCKRDGQRDGRQEGADEIGVPGVRLYMEDGTHVVTDIEGK
WSLYGLKPVTHVLRLDQTTLPLGAKLEVLDNRNSGTPESRFVDLKKGEFHKANFIITNCD
EKSVIADVAARRAAIAARPDTEAEAQVRLRLDPEGKVVPVGDVRGLPATGQALASGSTGA
VQPTSAPLIALPVAPANASSFVSGGGGSMGGTLGVQPAIPTGSLFSPLNGVPTSGLPSST
TSGSATGVGAQAMRPIGTGGAMLEPRANPLLPQAVPSPIELETLLPQLENNTLGFIGLKD
RDTVAGQSINVRVKGTAGTSLRLSVNGAALEERRVGKKTQLASKNIAAWEYIGVALRPGV
NTLKLEAVDGFGNVRGSADEITVVAPDKLGAIEVDLPEVARADLRTPVVVKVRLIDAAGV
PVTARTQLTLESDRGRWLTEDLNPTEPGTQVFMDGGAAEFQLMPPGEPGDARLRVSAGTF
VKEVRLALLPEMRPMIGVGIVEGVLDFTKRGKLPLGAMPAGAAFEAELSGLKDEGTNSRA
SGRAAFFFKGTVKGEYLLTAAFDSDKTRKDRLFRDIRPDEFYPIYGDSAVKGFDAQSTQK
LYVRIDKNRSYLLYGDFTTASSTEVRNLSQSNRSLTGLKHVYEDENVRATSYVSRTAQTQ
QVEEFRALGTSGPYYLSASNGEFVDNSEQIEIVVRDRNQPNIVLQRTAVARFVDYTVEPL
TRRLLFTHAIASIDANLNPQSIRVTYEVDSGGPKFTVAGTDVQVKVSENLQLGVVASTDQ
NPQNKRNLQALTGVARIGQNTSVAAELVKTDSDDKGHGHGARVEARYHDEKLAVVALAAK
TSKGFDNPGASFSAGHTEASARAEYRVDPTLAVRGEVLYSKDAAQVDERKGATVSVQKKL
SDKTVAEVGLRHGQSNNALGSSSGFDYGQISTYNGQMGSSIGANSVTTLGAAAAAAGVDT
QSQTTVRGRLSTEVPGVAGAQVFVEGEQDLKDGKRHVLAVGGNYAITDKTRVYGRYELIS
TLNGPYELDSTQRNNTGIVGIESNYMEGGRVYNEYRIADGAEGRGVQAAIGVRNTFKVNE
QIRVTGGIEHTRDMSGYSNSKNTGTGYAGGLGESTAITSGIEYITNRIKASGVYEARRGD
DANTRLFSAGFGFKLDPSWSLLARSIVSDSEGQGANAGNERHLQRHQIGIAYRPVDDDTW
NALARYERRSERVVGAGNAAGALQGSSVFGADNGASLPGKTSADIVSAHVNYNPEPGKAV
MARYAFKLSRADDGTLASKYWAHLVQARYTQDINQDWDFGVQAGLLYGKGGALQKTFGVE
VGYQVQKNMWVSAGYNFVGLNDRDLTANEYTSKGAYVRLRFKFDETHLGFASTGETNVAK
AAKAEKLAADAPEVAPLPMRTVLQAEALFEPAKSFIKPQAHDTLNTLAAQIKATEAQVVI
HISHSDAQGSADDRMQLVAQRTNAVRSYLIGRGVDVLRLRTDTKEDTQPVAGDDSSAKSR
WVVIAAAAHETR
NT seq
7599 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcactttcaatcccaggagcacacaccggccatcgtggcgcggatgggctgcc
gcgctcgctgctggcgcggcgctgctgctgggtggtgccgtgcaggaagcgaacgccgca
ccggccccggccggcatcgtgatccgcagcatcgccacgggcacctacgtgcccaacggc
ctggcgcagaccgagaccatctcgtccaacgaagtgatcgccacggtgctgccggtggaa
gcgctggtgctcacgcaggaccagtcgctgtcgcgcccgccggcgagcatcgtcacgctg
agccacctgctcaccaacaccggcaacgtcgcctccacctacacgctggcgctggccaac
aacgccggcggctgcgcggccgacacgctggatctgtccgctttgcgcgtggtgcgcgac
accaacaacaacggcgtggtcgatccggccgatccggtggtgcaactcaacgccgcgggt
gccattgctttgaagcccggcgagaccgccgcgctgctggtgcagggcacgatccccacg
gccgccacgggcgtggcctgcgtgggcctcacggccaccactgcgctgcaaggcctcacc
gcgatcaaccgcgacaccgtcaccgtcggcaacgccgccgcgctgcagctggtcaagtcg
gccagctaccccggcaacgtgatccccggccagacgcgcatcgacttctcggtctcgggc
accaacatcggcgcgcaggatgcgcagccgtccaacgtcatcgccccgaccaacacgccg
ctgctcgtgaacggcgcgccttccgcattggtcctcgtgcgcgatcccgtgcccgtcggc
acccagtacgtgcccggcaccttgcgcaccaccgccgccaacgccgtcaagctgtaccgc
ctggccaacgatccggcgttcagctaccgcaccgccgaagacgcctcggccgtcgaagtg
gccatcggcatctccacgcccgtggcgcgcaacgtgtccatcgcgatgcagttcgccgtc
aaggtcaacgccgaccaggtgggcgagatccgcaacaccgcgcacagccagtacaacgac
ggcaccggcccggccaccgtgccctcgaacaccatcgtcatcagctccacccaggcgcgc
atcggcgtggccaaggccgcgtccaccccgcgcgtgaaccgcagcgccgacggcaagacc
gacggcaccgccaccgtgcgcttcagcgtcaacgtgcgcaactacggcacgtcctggctg
tacggcgtgcaggccgccgacgtgatggaaggcgcaggcgccacgcagttcggcagctac
acggcagccgccgtgcccggcgcgaaccagtacaccatcgtgcccggctcgatcgtgatc
gcgcccgcacccagcggcggcaccgtcgccgcccccaaccccgccttcaagggcaccgcc
gccgcctcgaacctgctggccgacggcgccgtgctgcccgtgggcgggcagttcaccgtg
cagttcgatgcgcgcatcaacttcaccggccgcaccggcaccttgctgaacaccgtcaag
gcctcgggtgccctcaatgccggcggcccggcggtggccctggacgactccgtcaacggc
gacaaccccgacgccgacggcgacggcaaccccaacaacgacacctcgcccacgccggtg
tcgacccagctgcccacgctcacgctgaccaagcaggcctccatcgcccgtcgcgtgtcg
cccggcgtctacgagctggactacaccttcaaggtcaccaacaccggcgctgtcgccgcg
cccaacgtgcgcgtgatcgacaacctgaactgcaccttcgacatggacaagtcgagcggg
cagatcgcgtcgtgggaactgctgggcccgcccaaggccgccaacggcaacctcaacgcc
gccaccggcttcaccggccgcgccacctgcaaccgcaccacgcaggacagcgccgacccc
ttccagctgcccaccgaagtggcgctgagcctgaccgacggcgcccgcgcgctggcaccc
ggccagagcgagcagatccgcctgagcgtgcgcatcaccgagaaggcatcggccatcggc
gggcgcgtgtcgctcaccaacaaggcctgggccgccgccttcgagcagaacaccgtcaac
gtcacgcccaccatgctgctggcggccaccgccacctcggtgcaggcgctgctggtcgat
ccgcaaggcacggtctacaacgcactgacccgtcaacctgtggccggcgcgctggtcacc
tacacgcgccagtcgtgcagcagcggcacggccggcccgatcaccgcggccgagatctac
ggcgccgactcgggcacctacacgctccaccccaacggcagcgtctcgatgaccacgggc
gccgacggcgcctaccagttctacctgcagacgccgcccgtgacgggcctgtgcacgtac
gcgctgtccgtgaccccgcccgcgggcagcggctacgtgtacccctcgcagctgatcccc
gtcaccggtggttccttcaccagctgcggcgccgtcgtgcccagcgccgtgcccccgaag
gacgcggacccgaccagctattacttccaggtgcaggccggagccaagcctgacggcacg
ccgtgcgacgccgtgcacaaccacatcccgctcgacccgggcaacatcctgggcctggtg
ctgcgcaaggacggcagcaagcggcaggtcgagttcggcgacttcatcgactacgcgctc
accgtcaccaacaagaccggcttccccgtcaccggcgtcaccttcaacgacacgctgccc
ccaggcttcgcctacgtggccaacagcgtgcgcctgaacgggcaagtggtgcccaacccc
gccggcggcgccggcccgggcctgatcttccactaccccacgctggtggtggcccccgac
cagtcggccatggtgcgctaccgcgtgcgcatcggcgtgggcgcgcccaccaacggcgac
gccatcaaccgcgcgcgcgccacctcgggcccgatccagtcgaacctggccaactggacc
gtgcgcgtgacgggcggcgtgttctccgacgacgccttcgccttcggcaaggtgtatctc
gattgcaagcgcgatggccaacgcgacggccgccaagagggcgccgacgagatcggcgtg
cccggcgtgcgcctgtacatggaagacggcacccacgtcgtcaccgacatcgaaggcaag
tggagcctgtacggcctcaagcccgtcacgcacgtgctgcgcctggaccagaccacgctg
ccgctgggcgccaagctcgaagtgctcgacaaccgcaactccggcacgcccgagagccgc
ttcgtcgatctgaagaagggcgagttccacaaggccaacttcatcatcacgaactgcgac
gagaagagcgtcatcgccgacgtggccgcacgccgcgccgccattgccgcgcgccccgac
accgaggccgaagcccaggtgcgcctgcgcctggaccccgaaggcaaggtcgtgcccgtg
ggcgacgtgcgcggcctgccggccaccggccaggcactggccagcggcagcaccggcgcc
gtgcagcccacctccgcaccgctgatcgcgctgcccgtggcgccggccaacgccagcagc
ttcgtcagcggcggtggcggcagcatgggcggcacgctgggcgtgcagcccgcgatcccc
accggcagcctgttctcgccgctgaacggcgtgcccacctcgggcctgccgtcgtcgacc
accagcggctcggccaccggcgtcggcgcgcaggccatgcgccccatcggcaccggcggc
gcgatgctcgagccgcgcgccaacccgctgctgccccaggcggttccgagtcccatcgaa
ctcgagaccctgctgccccagctggagaacaacaccctgggcttcatcggcctgaaggac
cgcgacaccgtcgccggccagtcgatcaacgtgcgcgtcaagggcacggccggcacctcg
ttgcgcctgagcgtgaacggcgccgcgctggaagagcgccgcgtcggcaagaagacgcaa
ttggcgtccaagaacatcgccgcctgggaatacatcggcgtggccctgcgccccggcgtc
aacaccctcaagctcgaggccgtggacggcttcggcaacgtgcgcggcagcgccgacgag
atcaccgtcgtcgcccccgacaagctcggcgccatcgaggtcgacctgcccgaagtggcg
cgcgccgacctgcgcacgcccgtggtcgtcaaggtgcgcctgatcgacgcggccggcgtg
cccgtcaccgcccgcacgcaactcacgctggagagcgaccgcggccgctggctgaccgaa
gacctgaaccccaccgaaccgggcacccaggtcttcatggacggcggcgccgccgagttc
cagctgatgcccccgggcgagccgggcgatgcgcgcctgcgcgtgagcgccggcaccttc
gtcaaggaagtgcgcctggcgctgctgcccgagatgcgccccatgatcggcgtgggcatc
gtcgaaggcgtgctcgacttcaccaagcgcggcaagctgcccctgggcgcgatgcccgcc
ggcgccgccttcgaggcggaactctcgggcctgaaggacgaaggcaccaacagccgcgcc
agcggtcgcgctgccttcttcttcaagggcaccgtcaagggcgagtacctgctcaccgct
gccttcgactccgacaagacgcgcaaggaccgcctgttccgcgacatccgccccgacgag
ttctatcccatctacggcgactccgcggtcaagggcttcgacgcccagagcacgcaaaaa
ctctacgtgcgcatcgacaagaaccgctcctacctgctgtacggtgacttcaccaccgcc
agcagcaccgaggtgcgcaacctgagtcagagcaaccgttcgctcacgggcctgaagcac
gtgtacgaggacgagaacgtgcgcgccaccagctatgtctcgcgcaccgcgcagacgcag
caggtggaggagttccgcgcgctgggcacctcgggcccgtactacctgagcgccagcaac
ggcgagttcgtggacaacagcgagcagatcgagatcgtggtgcgcgaccgcaaccagccc
aacatcgtgctgcagcgcacggccgtggcgcgcttcgtggactacacggtggagccgctc
acgcgccgcctcctgttcacgcacgccatcgcctccatcgacgcgaacctgaacccgcag
tcgatccgcgtcacctacgaggtcgactcgggcggccccaagttcaccgtggccggcacc
gacgtgcaagtgaaggtcagcgagaacctgcagctgggcgtggtggcttccaccgaccag
aatccgcagaacaagcgcaacctgcaggcgctcacgggcgtggcgcgcatcggccagaac
accagcgtggcggccgagctggtcaagaccgactccgacgacaagggccacggccacggc
gcgcgcgtggaagcgcgctaccacgacgagaagctggccgtggtggccctggcggccaag
accagcaagggcttcgacaaccccggcgcgagcttctcggccggccacaccgaagcctcg
gcgcgcgccgagtaccgcgtcgacccgaccctggccgtgcgcggcgaggtgctctacagc
aaggacgcagcgcaggtcgacgagcgcaagggcgccacggtgagcgtgcagaagaagctc
agcgacaagaccgtcgccgaggtgggcctgcgccatggccagagcaacaacgcgctgggt
tcaagctcgggtttcgactacggccagatctccacctacaacggccagatgggcagcagc
atcggcgccaacagcgtgaccacgctgggcgcggccgccgccgcagccggcgtggacacg
cagagccagacgaccgtgcgcgggcgcctgtccaccgaagtgcccggcgtggccggcgcg
caggtgttcgtggaaggcgagcaggacctgaaggacggcaagcgccacgtgctggccgtg
ggcggcaactacgccatcaccgacaagacgcgcgtgtacggccgctacgagctgatctcc
acgctcaacggcccctacgagctggacagcacgcagcgcaacaacaccggcatcgtcggc
atcgagagcaactacatggaaggcggtcgcgtgtacaacgagtaccgcatcgccgacggc
gccgaagggcgcggcgtgcaggcggccatcggggtgcgcaacaccttcaaggtcaacgag
cagatccgcgtgaccgggggcatcgagcacacgcgcgacatgagcggctacagcaacagc
aagaacaccggcacgggctatgccggtgggctgggcgagtcgaccgcgatcaccagcggc
atcgagtacatcaccaaccggatcaaggccagcggcgtgtacgaagcgcgccgcggcgac
gacgcgaacacgcgcctgttcagcgccggcttcggcttcaagctcgatccgtcctggagc
ctgctggcgcgcagcatcgtgagcgacagcgaaggccagggcgccaacgcgggcaacgag
cgccacctgcagcgccaccagatcggcattgcgtaccggccggtggacgacgacacctgg
aacgcgctggcacgttacgagcgccgctccgagcgcgtggtgggcgcgggcaatgcggcc
ggtgcgctgcagggcagcagcgtcttcggcgccgacaacggcgccagcctgccgggcaag
accagcgcggacatcgtctcggcgcacgtcaactacaaccccgagccgggcaaggcggtg
atggcgcgctacgccttcaagctcagccgcgccgacgacggcacgctggccagcaagtac
tgggcgcacctggtgcaggcgcgctacacgcaggacatcaaccaggactgggacttcggc
gtgcaggccggcctgctgtacggcaagggcggcgcgctgcagaagaccttcggcgtcgag
gtgggctaccaggtgcagaagaacatgtgggtgtcggcgggctacaacttcgtgggcctg
aacgaccgcgacctgacggccaacgagtacacgagcaagggcgcctatgtgcggctgcgc
ttcaagttcgatgagacgcacctgggcttcgcttcgacgggggagacgaacgtggccaag
gctgcgaaggccgagaagctggctgcggatgcgccggaagtggccccgctgccgatgcgc
acggtgctgcaggccgaggcgctgttcgagcccgccaagtccttcatcaagccgcaggcg
cacgacacgctgaacacgctggccgcgcagatcaaggcgaccgaggcgcaggtggtgatc
cacatcagccactcggacgcgcaaggcagcgctgacgaccgcatgcagctggtcgcgcag
cggaccaacgcggtgcgcagctacctgatcgggcgcggcgtcgacgtgctgcgcctgcgc
accgacaccaaagaagacacgcagcctgtcgcgggcgatgacagcagcgccaagagccgc
tgggtcgtgatcgccgcggccgcgcacgaaacccgctga
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