Variovorax boronicumulans: CKY39_29315
Help
Entry
CKY39_29315 CDS
T05068
Name
(GenBank) 3-methylcrotonyl-CoA carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00280
Valine, leucine and isoleucine degradation
vbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CKY39_29315
Enzymes [BR:
vbo01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
CKY39_29315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Biotin_lipoyl_2
Dala_Dala_lig_C
HlyD_3
HlyD_D23
LAL_C2
RnfC_N
GCV_H
ATP-grasp_4
ATP-grasp_3
DUF2118
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ATA56866
UniProt:
A0A250DR64
LinkDB
All DBs
Position
complement(6356331..6358331)
Genome browser
AA seq
666 aa
AA seq
DB search
MFKKILIANRGEIACRVAATARRMAVRTVAVYSDADAHANHVRACDESVYLGGSAPKDSY
LRWEKILEAAKATGAEAVHPGYGFLSENEEFAQACADAGLAFIGPPPSAIKAMGLKAESK
QLMEKAGVPLVPGYHGSDQDPALLQREADRIGYPVLIKASAGGGGKGMRAVDKAADFEAA
LASCKREAINSFGDDAVLIEKYVQRPRHIEIQVFGDTQGNYVYLFERDCSVQRRHQKVLE
EAPAPGMTEAMRKQMGDAAVAAARAVNYVGAGTVEFIVEQREGGEMNFFFMEMNTRLQVE
HPVTEAITGLDLVEWQLRVASGEPLPAKQSELQIHGHAIEARICAENPDNNFLPATGTLR
VYRKPQATAFQRSRVRIDDGVREGGEISPFYDSMIAKLIVHGSTRAEALARLDAALAQVQ
IVGVSTNVQFLRGILATESFSKANLDTALIERERAVLFDREPLGLPLAAAAAITRTLVTE
WPTQLPDPFERRDGWRAHGEYKRRFDFEFRGTEHSALLTYRRDGGLNLAVGGVEGPLTIG
RFPTGEFELEFAGTRQTLDVHLDGATAHVFAAKGATRLTAIDRLAHAGDTHAEGGRLTAP
MPGKVVSFAVKAGDKVSRGQPLAVMEAMKMEHTIAAPTDGTVEELMFAPGEQVAEGDELL
RMAAAA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaagatcctcatcgccaaccgtggcgagatcgcctgccgcgtggccgcaact
gctcgccgcatggcggttcgcaccgtcgccgtgtactccgatgccgacgcgcacgccaac
cacgtgcgcgcctgcgacgagtcggtgtacctcggcggcagcgccccgaaggacagctac
ctgcgctgggaaaagatcctcgaggccgccaaggccacgggtgccgaagccgtgcacccg
ggctacggcttcctcagcgagaacgaagagttcgcgcaggcctgcgccgacgccggcctg
gccttcatcggcccgccgccctcggcgatcaaggccatgggcctcaaggccgagtcgaag
cagctgatggaaaaggccggcgtgccgctcgtgcccggctaccacggcagcgaccaggac
ccggcgctgctgcagcgcgaagccgaccgcatcggctacccggtgctcatcaaggccagc
gccggcggcggcggcaagggcatgcgcgcggtcgacaaggccgccgacttcgaggccgcg
ctggcctcgtgcaagcgcgaagccatcaacagcttcggcgacgacgcggtgctgatcgag
aagtacgtgcagcgcccgcgccacatcgagatccaggtgttcggtgacacgcagggcaac
tacgtctacctgttcgagcgcgactgctcggtgcagcggcgccaccagaaagtgctcgag
gaagcgcccgcacccggcatgaccgaggcgatgcgcaagcagatgggcgatgccgccgtg
gccgcggcgcgcgccgtgaactacgtcggcgcgggcacggtggagttcatcgtcgagcag
cgcgaaggcggcgagatgaacttcttcttcatggagatgaacacgcgcctgcaggtcgaa
cacccggtgacggaagcgatcaccggcctcgacctcgtcgaatggcaattgcgcgtggcg
tcgggcgagccgttgcctgccaagcaatcggaactgcagatccacggccacgccatcgag
gcgcgcatctgcgccgagaaccccgacaacaacttcctgcccgccaccggcaccttgcgc
gtgtaccgcaagccgcaagcgaccgccttccagcgcagccgcgtgcgcatcgacgatggc
gtgcgcgagggaggcgagatctcgcccttctacgactcgatgatcgccaagctcatcgtg
cacggcagcacgcgcgccgaagcgctggcccggctcgacgccgcgctggcgcaggtgcag
atcgtgggcgtgtcgaccaacgtgcagttcctgcgcggcatcctggcgaccgagtcgttc
tcgaaggccaacctcgacaccgcgctcattgagcgcgagcgcgccgtgctgttcgaccgc
gagccgctgggcctgccgctggccgcggccgccgccatcacgcgcacgctggtcaccgag
tggccgacgcagctgcccgaccccttcgaacgccgcgacggctggcgtgcacacggcgag
tacaagcgccgcttcgacttcgagttccgcggtaccgagcacagcgcgctgctgacctac
cgccgcgacggcggcctgaacctcgccgtgggcggtgtcgaaggcccgctcaccatcggc
cgctttcccacgggcgagttcgagctcgagttcgccggcacgcgccagaccctcgacgtg
cacctggacggcgccaccgcccacgtgttcgcggcgaagggcgccacgcgcctcacggcc
atcgaccgtctcgctcacgcgggcgacacccacgccgaaggcggccgcctcacggcgccg
atgcccggcaaggtcgtgtccttcgcggtcaaggccggcgacaaggtcagccgcggccag
ccgctggccgtgatggaagccatgaagatggagcacaccatcgccgcgccgaccgacggc
acggtggaagaactgatgttcgcgcccggcgagcaggtggcggaaggcgacgaattgttg
cgaatggctgcggcggcttaa
DBGET
integrated database retrieval system
